RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 GNB1P62873 340 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 TMEM136Q6ZRR5 245 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 SPRR3Q9UBC9 169 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 LINC00312Q9Y6C7 94 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 R4GMQ9 66 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 SYNGR1O43759 233 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 RENP00797 406 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 HLA-DOBP13765 273 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 PAX9P55771 341 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 CTXN1P60606 82 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 RPL18Q07020 188 aaKnown RBP16.9■□□□□ 0.3
AP1S3-205ENST00000415298 PRR31Q5SQ13 230 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 C1orf147Q96MC9 270 aaPredicted RBP16.9■□□□□ 0.3
AP1S3-205ENST00000415298 VGLL1Q99990 258 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 TPPP3Q9BW30 176 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 EMC9Q9Y3B6 208 aa16.9■□□□□ 0.3
AP1S3-205ENST00000415298 RPEL1Q2QD12 228 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 DDB2Q92466 427 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 ADAT3Q96EY9 351 aaPredicted RBP16.89■□□□□ 0.29
AP1S3-205ENST00000415298 UCN2Q96RP3 112 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 SRXN1Q9BYN0 137 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 OR10A2Q9H208 303 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 LIME1Q9H400 295 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 TRGV5A0A0B4J1U4 118 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 CD300LBA8K4G0 201 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 DHHO43323 396 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 MT-ATP8P03928 68 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 LY6DQ14210 128 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 SAMD5Q5TGI4 173 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 GCSAMQ8N6F7 178 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 RAB37Q96AX2 223 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 TMEM191AQ9H0A3 160 aa16.89■□□□□ 0.29
AP1S3-205ENST00000415298 CSDC2Q9Y534 153 aaKnown RBP16.89■□□□□ 0.29
AP1S3-205ENST00000415298 ZNF850A8MQ14 1090 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 MS4A18H0YCH9 400 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 SRSF10O75494 262 aaKnown RBP16.88■□□□□ 0.29
AP1S3-205ENST00000415298 COX8AP10176 69 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 MS4A18Q3C1V0 323 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 C10orf35Q96D05 121 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 CACNA1BQ00975 2339 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 GAGE12JA6NER3 117 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 NPIPB5A8MRT5 1133 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 CXCL13O43927 109 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 GAGE7O76087 117 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 NDUFB4O95168 129 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 GAGE12FP0CL80 117 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 GAGE12GP0CL81 117 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 GAGE12IP0CL82 117 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 GAGE4Q13068 117 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 WFDC2Q14508 124 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 TIMM23BQ5SRD1 257 aa16.88■□□□□ 0.29
AP1S3-205ENST00000415298 RELNP78509 3460 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 HMGB3O15347 200 aaKnown RBP16.87■□□□□ 0.29
AP1S3-205ENST00000415298 IGKV1D-33P01593 117 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 IGKV1-33P01594 117 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 EMC4Q5J8M3 183 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 LCNL1Q6ZST4 164 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 LRRC75AQ8NAA5 344 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 TM2D2Q9BX73 214 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 CDIP1Q9H305 208 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 NAPSAO96009 420 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 KLRD1Q13241 179 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 PRR30Q53SZ7 412 aaPredicted RBP16.87■□□□□ 0.29
AP1S3-205ENST00000415298 MMD2Q8IY49 270 aa16.87■□□□□ 0.29
AP1S3-205ENST00000415298 FABP5P3A8MUU1 101 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 SLC16A7O60669 478 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 EGR1P18146 543 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 KIR2DL2P43627 348 aaPredicted RBP16.86■□□□□ 0.29
AP1S3-205ENST00000415298 SGCBQ16585 318 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 OTPQ5XKR4 325 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 H1FNTQ75WM6 255 aaPredicted RBP16.86■□□□□ 0.29
AP1S3-205ENST00000415298 KIR3DL3Q8N743 410 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 ZNF525Q8N782 197 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 TMEM54Q969K7 222 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 SLC25A22Q9H936 323 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 ALKBH4Q9NXW9 302 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 SIGLEC8Q9NYZ4 499 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 ANXA10Q9UJ72 324 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 A0A1W2PP11 408 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 HLA-DQA1P01909 254 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 CATR1Q13166 79 aa16.86■□□□□ 0.29
AP1S3-205ENST00000415298 KALRNO60229 2985 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 PHF3Q92576 2039 aaKnown RBP16.85■□□□□ 0.29
AP1S3-205ENST00000415298 ANGPTL7O43827 346 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 IGHG3P01860 377 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 FKBP2P26885 142 aaKnown RBP16.85■□□□□ 0.29
AP1S3-205ENST00000415298 PLP2Q04941 152 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 SLC35E4Q6ICL7 350 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 PCSK4Q6UW60 755 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 Q6ZUT4 128 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 OR51T1Q8NGJ9 327 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 MCTS1Q9ULC4 181 aaKnown RBP16.85■□□□□ 0.29
AP1S3-205ENST00000415298 FXYD4P59646 89 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 STPG3Q8N7X2 389 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 OR2T6Q8NHC8 308 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 HILPDAQ9Y5L2 63 aa16.85■□□□□ 0.29
AP1S3-205ENST00000415298 SYS1-DBNDD2H3BUS1 97 aa16.84■□□□□ 0.29
AP1S3-205ENST00000415298 OR9G9P0C7N8 305 aa16.84■□□□□ 0.29
AP1S3-205ENST00000415298 ETDBQ3ZM63 59 aa16.84■□□□□ 0.29
AP1S3-205ENST00000415298 ZNF695Q8IW36 515 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms