RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 UFC1Q9Y3C8 167 aa2.83□□□□□ -1.96
HMGB3P23-201ENST00000414981 TIMM9Q9Y5J7 89 aa2.83□□□□□ -1.96
HMGB3P23-201ENST00000414981 A0A087WZ39 114 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMED7-TICAM2A0A0A6YYA0 188 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 A0A0A6YYD4 124 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 IGHV3-20A0A0C4DH32 117 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 C20orf202A1L168 122 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 MAP1LC3B2A6NCE7 125 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 GJE1A6NN92 205 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 K7EQS6 105 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 RAMP1O60894 148 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 TNFSF13O75888 250 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 DHRS3O75911 302 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 S1PR2O95136 353 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 IGKV3-11P04433 115 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 REG1AP05451 166 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 KRTAP1-4P0C5Y4 121 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 GABRG2P18507 467 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 SERPINA2P20848 420 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 VDAC1P21796 283 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 ATP6V0CP27449 155 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 BLVRBP30043 206 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 PPP1CCP36873 323 aaKnown RBP2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 AKR1C3P42330 323 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 TDGF1P3P51864 188 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 TCL1AP56279 114 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 PIGPP57054 158 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 HBG1P69891 147 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 HBG2P69892 147 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 CD164Q04900 197 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 FOXF1Q12946 379 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 LAGE3Q14657 143 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 NUMA1Q14980 2115 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 SHHQ15465 462 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 KISS1Q15726 138 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 CD226Q15762 336 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 HIST3H3Q16695 136 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 LRRC75BQ2VPJ9 315 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 CEACAM21Q3KPI0 293 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 COL5A1-AS1Q5SY13 56 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 C1orf189Q5VU69 101 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 FBXW9Q5XUX1 488 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR8G2PQ6IF36 304 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 FAM19A5Q7Z5A7 132 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 NIT1Q86X76 327 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM252Q8N6L7 170 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 CYB561D1Q8N8Q1 229 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR2M7Q8NG81 312 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR2Z1Q8NG97 314 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR51T1Q8NGJ9 327 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR51G1Q8NGK1 321 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR4X1Q8NH49 305 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 GPR119Q8TDV5 335 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 FRZBQ92765 325 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 CLDN23Q96B33 292 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 SMIM12Q96EX1 92 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 ARHGAP5-AS1Q96IT6 56 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 FOXC2Q99958 501 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 MIEN1Q9BRT3 115 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 MAP1LC3BQ9GZQ8 125 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM222Q9H0R3 208 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 MAP1LC3AQ9H492 121 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 ELL3Q9HB65 397 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF286AQ9HBT8 521 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 MANBALQ9NQG1 85 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 TBX21Q9UL17 535 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 TP53TG1Q9Y2A0 90 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZFP30Q9Y2G7 519 aa2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 LSM5Q9Y4Y9 91 aaKnown RBP2.82□□□□□ -1.96
HMGB3P23-201ENST00000414981 EML5Q05BV3 1969 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 IGKV3D-11A0A0A0MRZ8 115 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 IGLV3-32A0A0A0MS00 114 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 TRAV39A0A0B4J263 110 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 IGHV2-70DA0A0C4DH43 119 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 C3orf85A0A1B0GTC6 90 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 H7C1C5 153 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 CCL16O15467 120 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 KBTBD11O94819 623 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 SEMA4FO95754 770 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 HRASP01112 189 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 IGHG1P01857 330 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 CLPSP04118 112 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 SERPINA7P05543 415 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 DNAH10OSP0CZ25 163 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 PGA4P0DJD7 388 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 PGA5P0DJD9 388 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 BCL3P20749 454 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 GUCA1AP43080 201 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR3A4PP47883 348 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR1D4P47884 311 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 YPEL3P61236 119 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 SELENOTP62341 195 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 LCN6P62502 163 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 GNG3P63215 75 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 ENDOGQ14249 297 aaKnown RBP2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 HERPUD1Q15011 391 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 TGIF1Q15583 401 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM183BQ1AE95 376 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 NMSQ5H8A3 153 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 FAM120AOSQ5T036 256 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms