RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 TRAPPC5Q8IUR0 188 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 PFN4Q8NHR9 129 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 KLK6Q92876 244 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 TMEM106AQ96A25 262 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 CCDC42Q96M95 316 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 NIPSNAP1Q9BPW8 284 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 COMMD5Q9GZQ3 224 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 OR51V1Q9H2C8 321 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 FBXL12Q9NXK8 326 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 MRPL27Q9P0M9 148 aaKnown RBP0.77□□□□□ -2.29
ATG4C-204ENST00000414558 VPS29Q9UBQ0 182 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 SLC22A13Q9Y226 551 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 TOPBP1Q92547 1522 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 CAMSAP1Q5T5Y3 1602 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 KIF13BQ9NQT8 1826 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 HEATR5AQ86XA9 2040 aa0.77□□□□□ -2.29
ATG4C-204ENST00000414558 WRNQ14191 1432 aaPredicted RBP eCLIP0.76□□□□□ -2.29
ATG4C-204ENST00000414558 SETD5Q9C0A6 1442 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 MTUS2Q5JR59 1369 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 TGIF2-C20orf24A0A0A6YYL0 155 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 ATP5HO75947 161 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 IFNA10P01566 189 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 HTR1AP08908 422 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 CTXN2P0C2S0 81 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 AP3S2P59780 193 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 HBA1P69905 142 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 CCL7P80098 99 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 REEP5Q00765 189 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 TMED2Q15363 201 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 KISS1Q15726 138 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 LPCAT3Q6P1A2 487 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 LCN15Q6UWW0 184 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 ZNF826PQ6ZT77 177 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 OR5B17Q8NGF7 314 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 ITFG2Q969R8 447 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 TOMM6Q96B49 74 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 SCGB3A1Q96QR1 104 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 TSPAN32Q96QS1 320 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 C20orf27Q9GZN8 174 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 CMTM6Q9NX76 183 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 CKLFQ9UBR5 152 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 TMEM56-RWDD3S4R434 201 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 FREM1Q5H8C1 2179 aa0.76□□□□□ -2.29
ATG4C-204ENST00000414558 RIC1Q4ADV7 1423 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 TTC21AQ8NDW8 1320 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 FUOMA2VDF0 154 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 DPRXA6NFQ7 191 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 CLDN24A6NM45 220 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 KPNA3O00505 521 aaPredicted RBP0.75□□□□□ -2.29
ATG4C-204ENST00000414558 FAAHO00519 579 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 LYPLA2O95372 231 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 TTRP02766 147 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 SHBGP04278 402 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 TCRBP04435 133 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 IFNA6P05013 189 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 RPS17P08708 135 aaKnown RBP0.75□□□□□ -2.29
ATG4C-204ENST00000414558 COX6A1P12074 109 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 S100A5P33763 92 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 RPL5P46777 297 aaKnown RBP0.75□□□□□ -2.29
ATG4C-204ENST00000414558 EIF2B2P49770 351 aaKnown RBP0.75□□□□□ -2.29
ATG4C-204ENST00000414558 LSM6P62312 80 aaKnown RBP0.75□□□□□ -2.29
ATG4C-204ENST00000414558 BASP1P80723 227 aaKnown RBP0.75□□□□□ -2.29
ATG4C-204ENST00000414558 MRPS25P82663 173 aaKnown RBP0.75□□□□□ -2.29
ATG4C-204ENST00000414558 SRSF6Q13247 344 aaKnown RBP0.75□□□□□ -2.29
ATG4C-204ENST00000414558 ZNF846Q147U1 533 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 CDK5R1Q15078 307 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 SPA17Q15506 151 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 C10orf55Q5SWW7 151 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 AAED1Q7RTV5 226 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 CLDN22Q8N7P3 220 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 C12orf29Q8N999 325 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 OR4D11Q8NGI4 311 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 TERB2Q8NHR7 220 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 DCUN1D1Q96GG9 259 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 PPP1R2P1Q96PQ5 205 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 CCDC94Q9BW85 323 aaPredicted RBP0.75□□□□□ -2.29
ATG4C-204ENST00000414558 MIXL1Q9H2W2 232 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 TP73-AS1Q9UF72 201 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 COL4A5P29400 1685 aa0.75□□□□□ -2.29
ATG4C-204ENST00000414558 PCF11O94913 1555 aaKnown RBP0.74□□□□□ -2.29
ATG4C-204ENST00000414558 BAZ2BQ9UIF8 2168 aaKnown RBP0.74□□□□□ -2.29
ATG4C-204ENST00000414558 NEO1Q92859 1461 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 ADGRL3Q9HAR2 1447 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 DOCK5Q9H7D0 1870 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 KIF1BO60333 1816 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 A0A0D9SG52 128 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 EXOC1LA0A1B0GW35 172 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 C19orf84I3L1E1 186 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 HCRTO43612 131 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 SULT1B1O43704 296 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 FADS1O60427 444 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 UBBP0CG47 229 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 RNASE3P12724 160 aaKnown RBP0.74□□□□□ -2.29
ATG4C-204ENST00000414558 HSD11B1P28845 292 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 ERVS71-1P61550 626 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 ARF6P62330 175 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 RANP62826 216 aaKnown RBP0.74□□□□□ -2.29
ATG4C-204ENST00000414558 RUNX1Q01196 453 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 AESQ08117 197 aa0.74□□□□□ -2.29
ATG4C-204ENST00000414558 EDDM3AQ14507 147 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms