RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 PRR20AP86496 221 aa17.83■□□□□ 0.44
AC005540.1-201ENST00000413911 OR11H2Q8NH07 326 aa17.83■□□□□ 0.44
AC005540.1-201ENST00000413911 VCX3AQ9NNX9 186 aa17.83■□□□□ 0.44
AC005540.1-201ENST00000413911 DEFB4AO15263 64 aa17.82■□□□□ 0.44
AC005540.1-201ENST00000413911 TBC1D26Q86UD7 250 aa17.82■□□□□ 0.44
AC005540.1-201ENST00000413911 CROCCP3Q8IVE0 287 aa17.82■□□□□ 0.44
AC005540.1-201ENST00000413911 ZNF114Q8NC26 417 aa17.82■□□□□ 0.44
AC005540.1-201ENST00000413911 C11orf45Q8TAV5 145 aa17.82■□□□□ 0.44
AC005540.1-201ENST00000413911 TSC22D3Q99576 134 aa17.82■□□□□ 0.44
AC005540.1-201ENST00000413911 TXN2Q99757 166 aa17.82■□□□□ 0.44
AC005540.1-201ENST00000413911 C11orf68Q9H3H3 251 aaKnown RBP17.82■□□□□ 0.44
AC005540.1-201ENST00000413911 FBXL17Q9UF56 701 aa17.82■□□□□ 0.44
AC005540.1-201ENST00000413911 SMIM18P0DKX4 95 aa17.81■□□□□ 0.44
AC005540.1-201ENST00000413911 PRSS3P35030 304 aa17.81■□□□□ 0.44
AC005540.1-201ENST00000413911 CMC4P56277 68 aaPredicted RBP17.81■□□□□ 0.44
AC005540.1-201ENST00000413911 PRCDQ00LT1 54 aa17.81■□□□□ 0.44
AC005540.1-201ENST00000413911 TOMM20LQ6UXN7 152 aa17.81■□□□□ 0.44
AC005540.1-201ENST00000413911 TCF24Q7RTU0 167 aa17.81■□□□□ 0.44
AC005540.1-201ENST00000413911 FAM24BQ8N5W8 94 aa17.81■□□□□ 0.44
AC005540.1-201ENST00000413911 ST8SIA2Q92186 375 aa17.81■□□□□ 0.44
AC005540.1-201ENST00000413911 IZUMO4Q1ZYL8 232 aa17.8■□□□□ 0.44
AC005540.1-201ENST00000413911 PINX1Q96BK5 328 aaKnown RBP17.8■□□□□ 0.44
AC005540.1-201ENST00000413911 VSIRQ9H7M9 311 aa17.8■□□□□ 0.44
AC005540.1-201ENST00000413911 FAM212BQ9NTI7 297 aaPredicted RBP17.8■□□□□ 0.44
AC005540.1-201ENST00000413911 IGHV3-66A0A0C4DH42 116 aa17.79■□□□□ 0.44
AC005540.1-201ENST00000413911 EIF4EP06730 217 aaKnown RBP17.79■□□□□ 0.44
AC005540.1-201ENST00000413911 SPINK9Q5DT21 86 aa17.79■□□□□ 0.44
AC005540.1-201ENST00000413911 H2BFWTQ7Z2G1 175 aa17.79■□□□□ 0.44
AC005540.1-201ENST00000413911 OR4A16Q8NH70 328 aa17.79■□□□□ 0.44
AC005540.1-201ENST00000413911 GPX8Q8TED1 209 aa17.79■□□□□ 0.44
AC005540.1-201ENST00000413911 MRGPRFQ96AM1 343 aa17.79■□□□□ 0.44
AC005540.1-201ENST00000413911 KIAA1109Q2LD37 5005 aa17.78■□□□□ 0.44
AC005540.1-201ENST00000413911 GNG7O60262 68 aa17.78■□□□□ 0.44
AC005540.1-201ENST00000413911 DFFBO76075 338 aa17.78■□□□□ 0.44
AC005540.1-201ENST00000413911 CA1P00915 261 aaPredicted RBP17.78■□□□□ 0.44
AC005540.1-201ENST00000413911 HSPE1P61604 102 aaKnown RBP17.78■□□□□ 0.44
AC005540.1-201ENST00000413911 RBMS2Q15434 407 aaKnown RBP17.78■□□□□ 0.44
AC005540.1-201ENST00000413911 LEMD1Q68G75 181 aa17.78■□□□□ 0.44
AC005540.1-201ENST00000413911 CMTM3Q96MX0 182 aa17.78■□□□□ 0.44
AC005540.1-201ENST00000413911 MS4A6AQ9H2W1 248 aa17.78■□□□□ 0.44
AC005540.1-201ENST00000413911 ZFAND3Q9H8U3 227 aa17.78■□□□□ 0.44
AC005540.1-201ENST00000413911 DEFB131AP59861 70 aa17.77■□□□□ 0.44
AC005540.1-201ENST00000413911 GIG44P09565 113 aaPredicted RBP17.76■□□□□ 0.43
AC005540.1-201ENST00000413911 TSPAN5P62079 268 aa17.76■□□□□ 0.43
AC005540.1-201ENST00000413911 MFFQ9GZY8 342 aa17.76■□□□□ 0.43
AC005540.1-201ENST00000413911 A0A1B0GU03 582 aa17.75■□□□□ 0.43
AC005540.1-201ENST00000413911 ST8SIA3O43173 380 aa17.75■□□□□ 0.43
AC005540.1-201ENST00000413911 NCS1P62166 190 aa17.75■□□□□ 0.43
AC005540.1-201ENST00000413911 LPCAT3Q6P1A2 487 aa17.75■□□□□ 0.43
AC005540.1-201ENST00000413911 GINS3Q9BRX5 216 aa17.75■□□□□ 0.43
AC005540.1-201ENST00000413911 FUNDC2Q9BWH2 189 aa17.75■□□□□ 0.43
AC005540.1-201ENST00000413911 COMMD3Q9UBI1 195 aa17.75■□□□□ 0.43
AC005540.1-201ENST00000413911 PUS1Q9Y606 427 aaKnown RBP eCLIP17.75■□□□□ 0.43
AC005540.1-201ENST00000413911 IGKV1-5P01602 117 aa17.74■□□□□ 0.43
AC005540.1-201ENST00000413911 IFNA4P05014 189 aa17.74■□□□□ 0.43
AC005540.1-201ENST00000413911 UCP3P55916 312 aa17.74■□□□□ 0.43
AC005540.1-201ENST00000413911 PAFAH1B2P68402 229 aa17.74■□□□□ 0.43
AC005540.1-201ENST00000413911 ERHP84090 104 aaKnown RBP17.74■□□□□ 0.43
AC005540.1-201ENST00000413911 TMEM187Q14656 261 aa17.74■□□□□ 0.43
AC005540.1-201ENST00000413911 C2CD4CQ8TF44 421 aa17.74■□□□□ 0.43
AC005540.1-201ENST00000413911 MRPL36Q9P0J6 103 aaKnown RBP17.74■□□□□ 0.43
AC005540.1-201ENST00000413911 TMEM50AO95807 157 aa17.73■□□□□ 0.43
AC005540.1-201ENST00000413911 P0C879 139 aa17.73■□□□□ 0.43
AC005540.1-201ENST00000413911 PVRIGQ6DKI7 326 aa17.73■□□□□ 0.43
AC005540.1-201ENST00000413911 SNX29P2Q8IUI4 249 aa17.73■□□□□ 0.43
AC005540.1-201ENST00000413911 Q8NAQ8 132 aa17.73■□□□□ 0.43
AC005540.1-201ENST00000413911 APLNQ9ULZ1 77 aa17.73■□□□□ 0.43
AC005540.1-201ENST00000413911 FAT2Q9NYQ8 4349 aa17.72■□□□□ 0.43
AC005540.1-201ENST00000413911 AGRNO00468 2067 aa17.72■□□□□ 0.43
AC005540.1-201ENST00000413911 A0A0B4J293 547 aa17.72■□□□□ 0.43
AC005540.1-201ENST00000413911 DNASE2O00115 360 aaPredicted RBP17.72■□□□□ 0.43
AC005540.1-201ENST00000413911 S100GP29377 79 aa17.72■□□□□ 0.43
AC005540.1-201ENST00000413911 ZNF600Q6ZNG1 722 aa17.72■□□□□ 0.43
AC005540.1-201ENST00000413911 DUSP18Q8NEJ0 188 aa17.72■□□□□ 0.43
AC005540.1-201ENST00000413911 PCLOQ9Y6V0 5065 aa17.72■□□□□ 0.43
AC005540.1-201ENST00000413911 DNAH2Q9P225 4427 aa17.72■□□□□ 0.43
AC005540.1-201ENST00000413911 M0QYG6 137 aa17.71■□□□□ 0.43
AC005540.1-201ENST00000413911 CD5P06127 495 aa17.71■□□□□ 0.43
AC005540.1-201ENST00000413911 RBMY1A1P0DJD3 496 aaKnown RBP17.71■□□□□ 0.43
AC005540.1-201ENST00000413911 RBMY1CP0DJD4 496 aa17.71■□□□□ 0.43
AC005540.1-201ENST00000413911 PI3P19957 117 aa17.71■□□□□ 0.43
AC005540.1-201ENST00000413911 NPBWR1P48145 328 aa17.71■□□□□ 0.43
AC005540.1-201ENST00000413911 VBP1P61758 197 aa17.71■□□□□ 0.43
AC005540.1-201ENST00000413911 RPL11P62913 178 aaKnown RBP17.71■□□□□ 0.43
AC005540.1-201ENST00000413911 RBMY1FQ15415 496 aaKnown RBP17.71■□□□□ 0.43
AC005540.1-201ENST00000413911 MLANAQ16655 118 aa17.71■□□□□ 0.43
AC005540.1-201ENST00000413911 TRAV2A0A0B4J234 112 aa17.7■□□□□ 0.42
AC005540.1-201ENST00000413911 APOA1P02647 267 aa17.7■□□□□ 0.42
AC005540.1-201ENST00000413911 ELK1P19419 428 aa17.7■□□□□ 0.42
AC005540.1-201ENST00000413911 TP53RKQ96S44 253 aa17.7■□□□□ 0.42
AC005540.1-201ENST00000413911 FNDC4Q9H6D8 234 aaPredicted RBP17.7■□□□□ 0.42
AC005540.1-201ENST00000413911 SCPEP1Q9HB40 452 aa17.7■□□□□ 0.42
AC005540.1-201ENST00000413911 DNAH17Q9UFH2 4485 aa17.69■□□□□ 0.42
AC005540.1-201ENST00000413911 IGLL5B9A064 214 aa17.69■□□□□ 0.42
AC005540.1-201ENST00000413911 INS-IGF2F8WCM5 200 aa17.69■□□□□ 0.42
AC005540.1-201ENST00000413911 RNASE2P10153 161 aaKnown RBP17.69■□□□□ 0.42
AC005540.1-201ENST00000413911 RCVRNP35243 200 aa17.69■□□□□ 0.42
AC005540.1-201ENST00000413911 ALDH3B2P48448 385 aa17.69■□□□□ 0.42
AC005540.1-201ENST00000413911 PPP5CP53041 499 aa17.69■□□□□ 0.42
AC005540.1-201ENST00000413911 TRPT1Q86TN4 253 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms