RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 OR2V2Q96R30 315 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 CHRDL1Q9BU40 450 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 PLSCR4Q9NRQ2 329 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 AHCTF1Q8WYP5 2266 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 TEX50A0A1B0GTY4 177 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 PSMB11A5LHX3 300 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 NDUFB8O95169 186 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 SLAQ13239 276 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 C9orf106Q8NAJ2 232 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 FAM222BQ8WU58 562 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 GRAMD2BQ96HH9 432 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 LINC00574Q9H8X3 128 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 BET1LQ9NYM9 111 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 YLPM1P49750 1951 aaKnown RBP14.37□□□□□ -0.11
SDCBP-202ENST00000413219 GATA2P23769 480 aaPredicted RBP14.37□□□□□ -0.11
SDCBP-202ENST00000413219 LPAL2Q16609 132 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 MOGAT3Q86VF5 341 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 FAM19A2Q8N3H0 131 aa14.37□□□□□ -0.11
SDCBP-202ENST00000413219 PRR33A8MZF0 331 aa14.36□□□□□ -0.11
SDCBP-202ENST00000413219 UBE2L3P68036 154 aaKnown RBP14.36□□□□□ -0.11
SDCBP-202ENST00000413219 SPACA3Q8IXA5 215 aa14.36□□□□□ -0.11
SDCBP-202ENST00000413219 OR9G1Q8NH87 305 aa14.36□□□□□ -0.11
SDCBP-202ENST00000413219 SLC25A2Q9BXI2 301 aa14.36□□□□□ -0.11
SDCBP-202ENST00000413219 CLEC7AQ9BXN2 247 aa14.36□□□□□ -0.11
SDCBP-202ENST00000413219 SAP30LQ9HAJ7 183 aa14.36□□□□□ -0.11
SDCBP-202ENST00000413219 OR2J3O76001 311 aa14.35□□□□□ -0.11
SDCBP-202ENST00000413219 NTF3P20783 257 aa14.35□□□□□ -0.11
SDCBP-202ENST00000413219 MSMPQ1L6U9 139 aa14.35□□□□□ -0.11
SDCBP-202ENST00000413219 WNT10AQ9GZT5 417 aa14.35□□□□□ -0.11
SDCBP-202ENST00000413219 TCF21O43680 179 aa14.35□□□□□ -0.11
SDCBP-202ENST00000413219 TSPOP30536 169 aa14.35□□□□□ -0.11
SDCBP-202ENST00000413219 TBR1Q16650 682 aa14.35□□□□□ -0.11
SDCBP-202ENST00000413219 ZNF71Q9NQZ8 489 aaPredicted RBP14.35□□□□□ -0.11
SDCBP-202ENST00000413219 AMMECR1Q9Y4X0 333 aaPredicted RBP14.35□□□□□ -0.11
SDCBP-202ENST00000413219 INS-IGF2F8WCM5 200 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 DLL1O00548 723 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 HSBP1O75506 76 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 CT45A6P0DMU7 189 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 CT45A5P0DMU8 189 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 CT45A7P0DMV0 189 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 ATP1A1-AS1Q5TC04 95 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 SLC25A48Q6ZT89 311 aaKnown RBP14.34□□□□□ -0.11
SDCBP-202ENST00000413219 BHLHA15Q7RTS1 189 aaPredicted RBP14.34□□□□□ -0.11
SDCBP-202ENST00000413219 FAM168AQ92567 244 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 DKK4Q9UBT3 224 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 SLC25A15Q9Y619 301 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 TRAV9-2A0A087WT02 112 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 IGHV2-26A0A0B4J1V2 119 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 SRRM4A7MD48 611 aaKnown RBP14.34□□□□□ -0.11
SDCBP-202ENST00000413219 MFAP2P55001 183 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 ATP5L2Q7Z4Y8 100 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 OR8B3Q8NGG8 313 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 OR8B2Q96RD0 313 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 PRO3102Q9H379 93 aa14.34□□□□□ -0.11
SDCBP-202ENST00000413219 FAM181BA6NEQ2 426 aa14.33□□□□□ -0.12
SDCBP-202ENST00000413219 PEX7O00628 323 aa14.33□□□□□ -0.12
SDCBP-202ENST00000413219 TM4SF5O14894 197 aa14.33□□□□□ -0.12
SDCBP-202ENST00000413219 CA1P00915 261 aaPredicted RBP14.33□□□□□ -0.12
SDCBP-202ENST00000413219 GATA4P43694 442 aa14.33□□□□□ -0.12
SDCBP-202ENST00000413219 TNXAQ16473 311 aa14.33□□□□□ -0.12
SDCBP-202ENST00000413219 SPRNQ5BIV9 151 aa14.33□□□□□ -0.12
SDCBP-202ENST00000413219 NUP35Q8NFH5 326 aa14.33□□□□□ -0.12
SDCBP-202ENST00000413219 OR1L4Q8NGR5 311 aa14.33□□□□□ -0.12
SDCBP-202ENST00000413219 FREM2Q5SZK8 3169 aa14.33□□□□□ -0.12
SDCBP-202ENST00000413219 TOMM40O96008 361 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 SAA1P0DJI8 122 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-202ENST00000413219 KLF3P57682 345 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-202ENST00000413219 FAM162BQ5T6X4 162 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 ZNF329Q86UD4 541 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 NUDT10Q8NFP7 164 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 OSR1Q8TAX0 266 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-202ENST00000413219 ITLN1Q8WWA0 313 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 SARAFQ96BY9 339 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 NUDT11Q96G61 164 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 ALKBH7Q9BT30 221 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-202ENST00000413219 SSBP3Q9BWW4 388 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-202ENST00000413219 ARRDC1-AS1Q9H2J1 176 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 ZNF355PQ9NSJ1 428 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 RPUSD1Q9UJJ7 312 aaKnown RBP14.32□□□□□ -0.12
SDCBP-202ENST00000413219 PROCRQ9UNN8 238 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 TRAV5A0A0B4J249 113 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 M0R2Z0 102 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 IGKV1-16P04430 117 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 GNG10P50151 68 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 MLANAQ16655 118 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 GDF5OSQ5U4N7 250 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 NHLRC2Q8NBF2 726 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 SNRNP40Q96DI7 357 aaKnown RBP14.32□□□□□ -0.12
SDCBP-202ENST00000413219 SMIM12Q96EX1 92 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 PAXXQ9BUH6 204 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 NDUFA4L2Q9NRX3 87 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 TNFRSF19Q9NS68 423 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 PPIAL4AQ9Y536 164 aa14.32□□□□□ -0.12
SDCBP-202ENST00000413219 FRYLO94915 3013 aa14.31□□□□□ -0.12
SDCBP-202ENST00000413219 COX7A2P2O60397 106 aa14.31□□□□□ -0.12
SDCBP-202ENST00000413219 HIST1H1EP10412 219 aaKnown RBP14.31□□□□□ -0.12
SDCBP-202ENST00000413219 CD59P13987 128 aa14.31□□□□□ -0.12
SDCBP-202ENST00000413219 UBE2G1P62253 170 aa14.31□□□□□ -0.12
SDCBP-202ENST00000413219 ERHP84090 104 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms