RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 CADM3Q8N126 398 aa8.66□□□□□ -1.02
LINC00963-201ENST00000412141 ARRDC1Q8N5I2 433 aa8.66□□□□□ -1.02
LINC00963-201ENST00000412141 SLC35G3Q8N808 338 aa8.66□□□□□ -1.02
LINC00963-201ENST00000412141 TMEM229BQ8NBD8 167 aa8.66□□□□□ -1.02
LINC00963-201ENST00000412141 TERB2Q8NHR7 220 aa8.66□□□□□ -1.02
LINC00963-201ENST00000412141 ZFAND1Q8TCF1 268 aa8.66□□□□□ -1.02
LINC00963-201ENST00000412141 GGTLC1Q9BX51 225 aa8.66□□□□□ -1.02
LINC00963-201ENST00000412141 C5orf66Q9H5L9 145 aa8.66□□□□□ -1.02
LINC00963-201ENST00000412141 FAM212BQ9NTI7 297 aaPredicted RBP8.66□□□□□ -1.02
LINC00963-201ENST00000412141 LOC102724200A0A096LPH7 203 aaPredicted RBP8.65□□□□□ -1.02
LINC00963-201ENST00000412141 TRAV25A0A0B4J276 109 aa8.65□□□□□ -1.02
LINC00963-201ENST00000412141 GABARAPH6UMI1 98 aa8.65□□□□□ -1.02
LINC00963-201ENST00000412141 I3L2K1 104 aa8.65□□□□□ -1.02
LINC00963-201ENST00000412141 GNG7O60262 68 aa8.65□□□□□ -1.02
LINC00963-201ENST00000412141 CTSDP07339 412 aaPredicted RBP8.65□□□□□ -1.02
LINC00963-201ENST00000412141 TBPP20226 339 aa8.65□□□□□ -1.02
LINC00963-201ENST00000412141 IL18Q14116 193 aa8.65□□□□□ -1.02
LINC00963-201ENST00000412141 CCDC71LQ8N9Z2 235 aa8.65□□□□□ -1.02
LINC00963-201ENST00000412141 C15orf40Q8WUR7 153 aa8.65□□□□□ -1.02
LINC00963-201ENST00000412141 RRNAD1Q96FB5 475 aaKnown RBP8.65□□□□□ -1.02
LINC00963-201ENST00000412141 ZNF486Q96H40 463 aaPredicted RBP8.65□□□□□ -1.02
LINC00963-201ENST00000412141 DIRAS2Q96HU8 199 aa8.65□□□□□ -1.02
LINC00963-201ENST00000412141 A0A0G2JRQ6 117 aa8.64□□□□□ -1.03
LINC00963-201ENST00000412141 TEX13DA0A0J9YY54 714 aaPredicted RBP8.64□□□□□ -1.03
LINC00963-201ENST00000412141 CD74P04233 296 aa8.64□□□□□ -1.03
LINC00963-201ENST00000412141 RPL35AP18077 110 aaKnown RBP8.64□□□□□ -1.03
LINC00963-201ENST00000412141 HOXA1P49639 335 aaPredicted RBP8.64□□□□□ -1.03
LINC00963-201ENST00000412141 RELQ04864 619 aaPredicted RBP8.64□□□□□ -1.03
LINC00963-201ENST00000412141 GBGT1Q8N5D6 347 aa8.64□□□□□ -1.03
LINC00963-201ENST00000412141 TMEM116Q8NCL8 245 aa8.64□□□□□ -1.03
LINC00963-201ENST00000412141 RNF2Q99496 336 aa8.64□□□□□ -1.03
LINC00963-201ENST00000412141 PDCD10Q9BUL8 212 aa8.64□□□□□ -1.03
LINC00963-201ENST00000412141 RHPN1-AS1Q9BWJ2 59 aa8.64□□□□□ -1.03
LINC00963-201ENST00000412141 C6orf62Q9GZU0 229 aaPredicted RBP8.64□□□□□ -1.03
LINC00963-201ENST00000412141 SMPXQ9UHP9 88 aa8.64□□□□□ -1.03
LINC00963-201ENST00000412141 C14orf166Q9Y224 244 aaKnown RBP8.64□□□□□ -1.03
LINC00963-201ENST00000412141 IGHV3-66A0A0C4DH42 116 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 IGHV7-4-1A0A0J9YVY3 117 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 DISC1C4P0D8 188 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 K7EMT4 169 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 TSPAN4O14817 238 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 ATG12O94817 140 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 OR5AC1P0C628 307 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 P0C879 139 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 MLANAQ16655 118 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 Q6ZRM9 215 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 WFDC3Q8IUB2 231 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 APRG1Q8IVJ8 170 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 ZNF414Q96IQ9 312 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 SPAG8Q99932 426 aaPredicted RBP8.63□□□□□ -1.03
LINC00963-201ENST00000412141 OVOL2Q9BRP0 275 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 NXF2Q9GZY0 626 aaKnown RBP8.63□□□□□ -1.03
LINC00963-201ENST00000412141 ENY2Q9NPA8 101 aa8.63□□□□□ -1.03
LINC00963-201ENST00000412141 TRAV14DV4A0A0A6YYC5 116 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 LCE6AA0A183 80 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 OR4C46A6NHA9 309 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 C15orf62A8K5M9 175 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 CHEK1O14757 476 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 NXPH3O95157 252 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 AKAIN1P0CW23 69 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 UCP1P25874 307 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 MEF2DQ14814 521 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 ZNF124Q15973 351 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 ODF3L2Q3SX64 289 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 TOMM20LQ6UXN7 152 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 ZNF114Q8NC26 417 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 DUSP18Q8NEJ0 188 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 OR4C16Q8NGL9 310 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 LHFPL5Q8TAF8 219 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 DYNC2LI1Q8TCX1 351 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 RAB2BQ8WUD1 216 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 SMIM4Q8WVI0 70 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 ATP6V0BQ99437 205 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 TXN2Q99757 166 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 RTBDNQ9BSG5 229 aaPredicted RBP8.62□□□□□ -1.03
LINC00963-201ENST00000412141 PRR13Q9NZ81 148 aa8.62□□□□□ -1.03
LINC00963-201ENST00000412141 NOL3O60936 208 aaKnown RBP8.61□□□□□ -1.03
LINC00963-201ENST00000412141 APOHP02749 345 aaPredicted RBP8.61□□□□□ -1.03
LINC00963-201ENST00000412141 RNASE2P10153 161 aaKnown RBP8.61□□□□□ -1.03
LINC00963-201ENST00000412141 NPBWR1P48145 328 aa8.61□□□□□ -1.03
LINC00963-201ENST00000412141 SUB1P53999 127 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC00963-201ENST00000412141 RPL11P62913 178 aaKnown RBP8.61□□□□□ -1.03
LINC00963-201ENST00000412141 MRPS10P82664 201 aaKnown RBP8.61□□□□□ -1.03
LINC00963-201ENST00000412141 DEFB135Q30KP9 77 aa8.61□□□□□ -1.03
LINC00963-201ENST00000412141 LILRB2Q8N423 598 aa8.61□□□□□ -1.03
LINC00963-201ENST00000412141 OR51S1Q8NGJ8 323 aa8.61□□□□□ -1.03
LINC00963-201ENST00000412141 GLYATL2Q8WU03 294 aa8.61□□□□□ -1.03
LINC00963-201ENST00000412141 TMEM222Q9H0R3 208 aa8.61□□□□□ -1.03
LINC00963-201ENST00000412141 NAA60Q9H7X0 242 aa8.61□□□□□ -1.03
LINC00963-201ENST00000412141 MCUBQ9NWR8 336 aa8.61□□□□□ -1.03
LINC00963-201ENST00000412141 MRPL36Q9P0J6 103 aaKnown RBP8.61□□□□□ -1.03
LINC00963-201ENST00000412141 CACNG5Q9UF02 275 aa8.61□□□□□ -1.03
LINC00963-201ENST00000412141 PUS1Q9Y606 427 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC00963-201ENST00000412141 TMEM50AO95807 157 aa8.6□□□□□ -1.03
LINC00963-201ENST00000412141 OPRK1P41145 380 aa8.6□□□□□ -1.03
LINC00963-201ENST00000412141 APOC4P55056 127 aa8.6□□□□□ -1.03
LINC00963-201ENST00000412141 TMBIM6P55061 237 aa8.6□□□□□ -1.03
LINC00963-201ENST00000412141 SSBP1Q04837 148 aaKnown RBP8.6□□□□□ -1.03
LINC00963-201ENST00000412141 PMS2P11Q13670 270 aa8.6□□□□□ -1.03
LINC00963-201ENST00000412141 TMEM268Q5VZI3 342 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms