RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 OGNP20774 298 aaKnown RBP2.74□□□□□ -1.97
BRCA1-204ENST00000412061 RPS3P23396 243 aaKnown RBP eCLIP2.74□□□□□ -1.97
BRCA1-204ENST00000412061 POLR2HP52434 150 aaKnown RBP2.74□□□□□ -1.97
BRCA1-204ENST00000412061 FXYD7P58549 80 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 AKR1C1Q04828 323 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 RPL18Q07020 188 aaKnown RBP2.74□□□□□ -1.97
BRCA1-204ENST00000412061 DEFB115Q30KQ5 88 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 FAM229BQ4G0N7 80 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 FKBP1CQ5VVH2 108 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 C2orf91Q6ZV80 131 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 ANGPTL5Q86XS5 388 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 OR52R1Q8NGF1 315 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 CLDND2Q8NHS1 167 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 MUC7Q8TAX7 377 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 MIEN1Q9BRT3 115 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 OR8D2Q9GZM6 311 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 RNF122Q9H9V4 155 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 XAGE1AQ9HD64 81 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 SLC39A9Q9NUM3 307 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 CKLFQ9UBR5 152 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 MYH7BA7E2Y1 1941 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 TRPM3Q9HCF6 1732 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-204ENST00000412061 YEATS2Q9ULM3 1422 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 UBR2Q8IWV8 1755 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 PLXNB1O43157 2135 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 PLA2R1Q13018 1463 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 NUP210LQ5VU65 1888 aa2.74□□□□□ -1.97
BRCA1-204ENST00000412061 DENND4CQ5VZ89 1909 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 DOCK4Q8N1I0 1966 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 IGLV3-12A0A075B6K2 115 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 ZNF860A6NHJ4 632 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 FABP5P3A8MUU1 101 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 K7EM74 188 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 TAX1BP3O14907 124 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 NDUFA2O43678 99 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 NPYP01303 97 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 NFYBP25208 207 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 HIST1H4AP62805 103 aaKnown RBP2.73□□□□□ -1.97
BRCA1-204ENST00000412061 RRN3P1Q2M238 152 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 SPANXN3Q5MJ09 141 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 ZNF660Q6AZW8 331 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-204ENST00000412061 HRCT1Q6UXD1 115 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 ZNF705AQ6ZN79 300 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-204ENST00000412061 BPIFA4PQ86YQ2 179 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 OR8J3Q8NGG0 315 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 GPX7Q96SL4 187 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-204ENST00000412061 LAMTOR3Q9UHA4 124 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 TRAPPC2LQ9UL33 140 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 MYO10Q9HD67 2058 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 LCTP09848 1927 aa2.73□□□□□ -1.97
BRCA1-204ENST00000412061 TRAV36DV7A0A075B6V5 113 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 IGHV3OR16-8A0A075B7F1 116 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 LOC102725191A0A1B0GVB3 256 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 C17orf98A8MV24 154 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 C1QAP02745 245 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 BPGMP07738 259 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 GPX2P18283 190 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 KPRPQ5T749 579 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-204ENST00000412061 NOXRED1Q6NXP6 359 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 DCANP1Q8TF63 244 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 SLAMF6Q96DU3 332 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 BORCS8Q96FH0 119 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 TUBA4BQ9H853 241 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 ASF1BQ9NVP2 202 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 SPANXCQ9NY87 97 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 LAMTOR2Q9Y2Q5 125 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 MED31Q9Y3C7 131 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 NUBP2Q9Y5Y2 271 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 CCDC88AQ3V6T2 1871 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 ADGBQ8N7X0 1667 aa2.72□□□□□ -1.97
BRCA1-204ENST00000412061 A0A1B0GX51 115 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 TRDV1A0A1B0GX56 115 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 IRGMA1A4Y4 181 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 CDS2O95674 445 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 IGHV3-7P01780 117 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 TRGC2P03986 189 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 COX4I1P13073 169 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 S100A11P31949 105 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 CCR2P41597 374 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 INSL3P51460 131 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 YPEL3P61236 119 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-204ENST00000412061 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.98
BRCA1-204ENST00000412061 BIKQ13323 160 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 MIAQ16674 131 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 LINC01554Q52M75 96 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 AGTRAPQ6RW13 159 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 LRRC18Q8N456 261 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 Q8N9L7 120 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 OR10P1Q8NGE3 313 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 TERB2Q8NHR7 220 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 RNASE11Q8TAA1 199 aaKnown RBP2.71□□□□□ -1.98
BRCA1-204ENST00000412061 STAG3L4Q8TBR4 150 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 SMCR5Q8TEV8 140 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 FGF13Q92913 245 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 CARD19Q96LW7 228 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 ZNF285Q96NJ3 590 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 RTL8AQ9BWD3 113 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 AICDAQ9GZX7 198 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 TMEM126AQ9H061 195 aa2.71□□□□□ -1.98
BRCA1-204ENST00000412061 CACYBPQ9HB71 228 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms