RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 SCGB2B2Q4G0G5 96 aa16.57■□□□□ 0.24
MSH6-202ENST00000411819 TMEM116Q8NCL8 245 aa16.57■□□□□ 0.24
MSH6-202ENST00000411819 PDCD10Q9BUL8 212 aa16.57■□□□□ 0.24
MSH6-202ENST00000411819 NXF2Q9GZY0 626 aaKnown RBP16.57■□□□□ 0.24
MSH6-202ENST00000411819 COPZ2Q9P299 210 aa16.57■□□□□ 0.24
MSH6-202ENST00000411819 MTFP1Q9UDX5 166 aa16.57■□□□□ 0.24
MSH6-202ENST00000411819 C3orf85A0A1B0GTC6 90 aa16.56■□□□□ 0.24
MSH6-202ENST00000411819 ATG12O94817 140 aa16.56■□□□□ 0.24
MSH6-202ENST00000411819 IFNA17P01571 189 aa16.56■□□□□ 0.24
MSH6-202ENST00000411819 IGKV1-5P01602 117 aa16.56■□□□□ 0.24
MSH6-202ENST00000411819 RPL35AP18077 110 aaKnown RBP16.56■□□□□ 0.24
MSH6-202ENST00000411819 SNCAP37840 140 aa16.56■□□□□ 0.24
MSH6-202ENST00000411819 TFPI2P48307 235 aa16.56■□□□□ 0.24
MSH6-202ENST00000411819 ZNF414Q96IQ9 312 aa16.56■□□□□ 0.24
MSH6-202ENST00000411819 IGHV3OR16-13A0A075B7E8 117 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 IGHV3-74A0A0B4J1X5 117 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 CHEK1O14757 476 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 SPRY2O43597 315 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 HOXA1P49639 335 aaPredicted RBP16.55■□□□□ 0.24
MSH6-202ENST00000411819 PMS2P11Q13670 270 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 Q6ZWC4 215 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 STPG3Q8N7X2 389 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 CCDC71LQ8N9Z2 235 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 OR4D10Q8NGI6 311 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 RNASE11Q8TAA1 199 aaKnown RBP16.55■□□□□ 0.24
MSH6-202ENST00000411819 C15orf40Q8WUR7 153 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 OR10C1Q96KK4 312 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 ABHD1Q96SE0 405 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 TP53TG1Q9Y2A0 90 aa16.55■□□□□ 0.24
MSH6-202ENST00000411819 PLECQ15149 4684 aaKnown RBP16.55■□□□□ 0.24
MSH6-202ENST00000411819 EPPK1P58107 5090 aaKnown RBP16.55■□□□□ 0.24
MSH6-202ENST00000411819 TRAV14DV4A0A0A6YYC5 116 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 A0A0J9YWU9 116 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 UBE2CO00762 179 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 RGS5O15539 181 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 ST8SIA3O43173 380 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 RAB3DO95716 219 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 BMI1P35226 326 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 TAS2R19P59542 299 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 SP6Q3SY56 376 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 OR13C8Q8NGS7 320 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 ZFAND1Q8TCF1 268 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 GINS3Q9BRX5 216 aa16.54■□□□□ 0.24
MSH6-202ENST00000411819 A0A0B4J293 547 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 KIR2DL5BA0A0G2JN68 375 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 KIR2DL5BA0A0G2JPC4 375 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 CXorf65A6NEN9 183 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 NPBWR1P48145 328 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 LYG2Q86SG7 212 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 APRG1Q8IVJ8 170 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 KIR2DL5AQ8N109 375 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 TMEM229BQ8NBD8 167 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 DUSP18Q8NEJ0 188 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 KIR2DL5BQ8NHK3 375 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 TERB2Q8NHR7 220 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 RRNAD1Q96FB5 475 aaKnown RBP16.53■□□□□ 0.24
MSH6-202ENST00000411819 GALNT14Q96FL9 552 aa16.53■□□□□ 0.24
MSH6-202ENST00000411819 C6orf62Q9GZU0 229 aaPredicted RBP16.53■□□□□ 0.24
MSH6-202ENST00000411819 ALMS1Q8TCU4 4167 aa16.52■□□□□ 0.24
MSH6-202ENST00000411819 P0C879 139 aa16.52■□□□□ 0.24
MSH6-202ENST00000411819 STEAP1BQ6NZ63 245 aa16.52■□□□□ 0.24
MSH6-202ENST00000411819 GPR141Q7Z602 305 aa16.52■□□□□ 0.24
MSH6-202ENST00000411819 WFDC3Q8IUB2 231 aa16.52■□□□□ 0.24
MSH6-202ENST00000411819 GBGT1Q8N5D6 347 aa16.52■□□□□ 0.24
MSH6-202ENST00000411819 MARCH1Q8TCQ1 289 aa16.52■□□□□ 0.24
MSH6-202ENST00000411819 ENY2Q9NPA8 101 aa16.52■□□□□ 0.24
MSH6-202ENST00000411819 CD74P04233 296 aa16.51■□□□□ 0.23
MSH6-202ENST00000411819 ZNF124Q15973 351 aa16.51■□□□□ 0.23
MSH6-202ENST00000411819 FAAP20Q6NZ36 180 aa16.51■□□□□ 0.23
MSH6-202ENST00000411819 TOMM20LQ6UXN7 152 aa16.51■□□□□ 0.23
MSH6-202ENST00000411819 MRPS26Q9BYN8 205 aaKnown RBP16.51■□□□□ 0.23
MSH6-202ENST00000411819 MIXL1Q9H2W2 232 aa16.51■□□□□ 0.23
MSH6-202ENST00000411819 GABARAPH6UMI1 98 aa16.5■□□□□ 0.23
MSH6-202ENST00000411819 CORTO00230 105 aa16.5■□□□□ 0.23
MSH6-202ENST00000411819 UCP1P25874 307 aa16.5■□□□□ 0.23
MSH6-202ENST00000411819 ETV6P41212 452 aa16.5■□□□□ 0.23
MSH6-202ENST00000411819 SUB1P53999 127 aaKnown RBP eCLIP16.5■□□□□ 0.23
MSH6-202ENST00000411819 ZNF600Q6ZNG1 722 aa16.5■□□□□ 0.23
MSH6-202ENST00000411819 TCF24Q7RTU0 167 aa16.5■□□□□ 0.23
MSH6-202ENST00000411819 RNF183Q96D59 192 aa16.5■□□□□ 0.23
MSH6-202ENST00000411819 MAP6D1Q9H9H5 199 aa16.5■□□□□ 0.23
MSH6-202ENST00000411819 C14orf166Q9Y224 244 aaKnown RBP16.5■□□□□ 0.23
MSH6-202ENST00000411819 PUS1Q9Y606 427 aaKnown RBP eCLIP16.5■□□□□ 0.23
MSH6-202ENST00000411819 A0A0G2JRQ6 117 aa16.49■□□□□ 0.23
MSH6-202ENST00000411819 INS-IGF2F8WCM5 200 aa16.49■□□□□ 0.23
MSH6-202ENST00000411819 RNASE2P10153 161 aaKnown RBP16.49■□□□□ 0.23
MSH6-202ENST00000411819 OPRK1P41145 380 aa16.49■□□□□ 0.23
MSH6-202ENST00000411819 PAFAH1B2P68402 229 aa16.49■□□□□ 0.23
MSH6-202ENST00000411819 EWSR1Q01844 656 aaKnown RBP eCLIP16.49■□□□□ 0.233e-9■■■□□ 18.5
MSH6-202ENST00000411819 TNFRSF9Q07011 255 aa16.49■□□□□ 0.23
MSH6-202ENST00000411819 ST8SIA2Q92186 375 aa16.49■□□□□ 0.23
MSH6-202ENST00000411819 IGHV3-66A0A0C4DH42 116 aa16.48■□□□□ 0.23
MSH6-202ENST00000411819 B3GALNT1O75752 331 aa16.48■□□□□ 0.23
MSH6-202ENST00000411819 OR5AC1P0C628 307 aa16.48■□□□□ 0.23
MSH6-202ENST00000411819 CMC4P56277 68 aaPredicted RBP16.48■□□□□ 0.23
MSH6-202ENST00000411819 MRPS10P82664 201 aaKnown RBP16.48■□□□□ 0.23
MSH6-202ENST00000411819 MEF2DQ14814 521 aa16.48■□□□□ 0.23
MSH6-202ENST00000411819 SPCS2Q15005 226 aa16.48■□□□□ 0.23
MSH6-202ENST00000411819 TEX13DA0A0J9YY54 714 aaPredicted RBP16.47■□□□□ 0.23
MSH6-202ENST00000411819 CTDSP2O14595 271 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms