RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 PMP2P02689 132 aa10.37□□□□□ -0.75
HLA-DQB2-229ENST00000411527 APOHP02749 345 aaPredicted RBP10.37□□□□□ -0.75
HLA-DQB2-229ENST00000411527 TOMM20LQ6UXN7 152 aa10.37□□□□□ -0.75
HLA-DQB2-229ENST00000411527 STHQ8IWL8 128 aa10.37□□□□□ -0.75
HLA-DQB2-229ENST00000411527 Q8NAQ8 132 aa10.37□□□□□ -0.75
HLA-DQB2-229ENST00000411527 FCGR1BQ92637 280 aa10.37□□□□□ -0.75
HLA-DQB2-229ENST00000411527 PINX1Q96BK5 328 aaKnown RBP10.37□□□□□ -0.75
HLA-DQB2-229ENST00000411527 HRH4Q9H3N8 390 aa10.37□□□□□ -0.75
HLA-DQB2-229ENST00000411527 IGHV3-66A0A0C4DH42 116 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 LOC100506127A0A0U1RQW1 187 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 GPR31O00270 319 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 HLA-DMBP28068 263 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 FAM24BQ8N5W8 94 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 DUSP18Q8NEJ0 188 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 OR5H2Q8NGV7 314 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 OR6F1Q8NGZ6 308 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 OR4A16Q8NH70 328 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 FXYD6Q9H0Q3 95 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 VSIRQ9H7M9 311 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 RAB26Q9ULW5 256 aa10.36□□□□□ -0.75
HLA-DQB2-229ENST00000411527 AGRNO00468 2067 aa10.35□□□□□ -0.75
HLA-DQB2-229ENST00000411527 IGHV4-28A0A0C4DH34 117 aa10.35□□□□□ -0.75
HLA-DQB2-229ENST00000411527 RBMY1A1P0DJD3 496 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB2-229ENST00000411527 RBMY1CP0DJD4 496 aa10.35□□□□□ -0.75
HLA-DQB2-229ENST00000411527 RBMY1FQ15415 496 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB2-229ENST00000411527 PHLDA2Q53GA4 152 aa10.35□□□□□ -0.75
HLA-DQB2-229ENST00000411527 H2BFWTQ7Z2G1 175 aa10.35□□□□□ -0.75
HLA-DQB2-229ENST00000411527 ZNF114Q8NC26 417 aa10.35□□□□□ -0.75
HLA-DQB2-229ENST00000411527 S100A16Q96FQ6 103 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB2-229ENST00000411527 RABAC1Q9UI14 185 aa10.35□□□□□ -0.75
HLA-DQB2-229ENST00000411527 TRAV2A0A0B4J234 112 aa10.34□□□□□ -0.75
HLA-DQB2-229ENST00000411527 TAS2R46P59540 309 aa10.34□□□□□ -0.75
HLA-DQB2-229ENST00000411527 HSPE1P61604 102 aaKnown RBP10.34□□□□□ -0.75
HLA-DQB2-229ENST00000411527 ERHP84090 104 aaKnown RBP10.34□□□□□ -0.75
HLA-DQB2-229ENST00000411527 PRCDQ00LT1 54 aa10.34□□□□□ -0.75
HLA-DQB2-229ENST00000411527 LINC00336Q6ZUF6 198 aa10.34□□□□□ -0.75
HLA-DQB2-229ENST00000411527 CENPSQ8N2Z9 138 aa10.34□□□□□ -0.75
HLA-DQB2-229ENST00000411527 SEC22AQ96IW7 307 aa10.34□□□□□ -0.75
HLA-DQB2-229ENST00000411527 ANAPC10Q9UM13 185 aa10.34□□□□□ -0.75
HLA-DQB2-229ENST00000411527 PUS1Q9Y606 427 aaKnown RBP eCLIP10.34□□□□□ -0.75
HLA-DQB2-229ENST00000411527 IGHV4-4A0A075B6R2 117 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TRAV10A0A0B4J240 114 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 GIG44P09565 113 aaPredicted RBP10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 MIFP14174 115 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 NAT1P18440 290 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 S100GP29377 79 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 NPBWR1P48145 328 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 ZNF600Q6ZNG1 722 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 Q6ZTC4 211 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 LYSMD2Q8IV50 215 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TMEM231Q9H6L2 316 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 ZFAND3Q9H8U3 227 aa10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 FAM212BQ9NTI7 297 aaPredicted RBP10.33□□□□□ -0.76
HLA-DQB2-229ENST00000411527 A0A1B0GU03 582 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TMEM50AO95807 157 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 IGKV1-39P01597 117 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 IGKV1D-39P04432 117 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 NPPCP23582 126 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TMEM41BQ5BJD5 291 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 SPINK9Q5DT21 86 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TMEM69Q5SWH9 247 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 LPCAT3Q6P1A2 487 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 MORN3Q6PF18 240 aaPredicted RBP10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TBC1D26Q86UD7 250 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 STXBP6Q8NFX7 210 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 X6R8D5 127 aa10.32□□□□□ -0.76
HLA-DQB2-229ENST00000411527 RYR1P21817 5038 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 ELOA3CA0A087WX78 387 aaPredicted RBP10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 A0A1B0GVY2 172 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 ZNF705EA8MWA4 302 aaPredicted RBP10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TMEM127O75204 238 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 SPP1P10451 314 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 HLA-DMAP28067 261 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 PRSS3P35030 304 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 HRH1P35367 487 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 SNCAP37840 140 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TAS2R20P59543 309 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TSPAN5P62079 268 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 UBE2NLQ5JXB2 153 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 MRGPRFQ96AM1 343 aa10.31□□□□□ -0.76
HLA-DQB2-229ENST00000411527 FAT2Q9NYQ8 4349 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 A0A1W2PS18 150 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 K7EQG2 157 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 ZNF688P0C7X2 276 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 C4BPBP20851 252 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 IZUMO4Q1ZYL8 232 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 PVRIGQ6DKI7 326 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 SAMD12Q8N8I0 201 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 GRAMD2BQ96HH9 432 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 RNF126Q9BV68 326 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 YTHDF1Q9BYJ9 559 aaKnown RBP10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 CLEC5AQ9NY25 188 aa10.3□□□□□ -0.76
HLA-DQB2-229ENST00000411527 PPP5CP53041 499 aa10.29□□□□□ -0.76
HLA-DQB2-229ENST00000411527 ACTL10Q5JWF8 245 aa10.29□□□□□ -0.76
HLA-DQB2-229ENST00000411527 CROCCP3Q8IVE0 287 aa10.29□□□□□ -0.76
HLA-DQB2-229ENST00000411527 METTL26Q96S19 204 aa10.29□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TBC1D24Q9ULP9 559 aa10.29□□□□□ -0.76
HLA-DQB2-229ENST00000411527 DNAH2Q9P225 4427 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms