RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PCTPQ9UKL6 214 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 HEY1Q9Y5J3 304 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 DSCAML1Q8TD84 2053 aa2.94□□□□□ -1.94
LSM5-205ENST00000409952 BRWD3Q6RI45 1802 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 TP53BP1Q12888 1972 aaPredicted RBP2.93□□□□□ -1.94
LSM5-205ENST00000409952 SETBP1Q9Y6X0 1596 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 IRGMA1A4Y4 181 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 GGTLC3B5MD39 225 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 DEGS1O15121 323 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CYB5BO43169 146 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CST8O60676 142 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CDS2O95674 445 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CCL5P13501 91 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CD24P25063 80 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CA5AP35218 305 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 XCL1P47992 114 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 SRP9P49458 86 aaKnown RBP2.93□□□□□ -1.94
LSM5-205ENST00000409952 CCDC153Q494R4 210 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CCDC58Q4VC31 144 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.93□□□□□ -1.94
LSM5-205ENST00000409952 NOXRED1Q6NXP6 359 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 ZNF705AQ6ZN79 300 aaPredicted RBP2.93□□□□□ -1.94
LSM5-205ENST00000409952 C2orf91Q6ZV80 131 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 ZNF767PQ75MW2 155 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 SLAMF6Q96DU3 332 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 MIEN1Q9BRT3 115 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 DOHHQ9BU89 302 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 OR8D2Q9GZM6 311 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 SLC39A9Q9NUM3 307 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CKLFQ9UBR5 152 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 NUBP2Q9Y5Y2 271 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CABIN1Q9Y6J0 2220 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 TICRRQ7Z2Z1 1910 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 ZNF646O15015 1829 aaPredicted RBP2.93□□□□□ -1.94
LSM5-205ENST00000409952 KIF21BO75037 1637 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 CLASP1Q7Z460 1538 aa2.93□□□□□ -1.94
LSM5-205ENST00000409952 EIF4G3O43432 1585 aaKnown RBP2.92□□□□□ -1.94
LSM5-205ENST00000409952 ATAD5Q96QE3 1844 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 A0A087WX48 190 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 MDFIC2A0A1B0GVS7 189 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 EFCAB10A6NFE3 127 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 C19orf84I3L1E1 186 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 IGHV3-7P01780 117 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 GZMBP10144 247 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 RPL7P18124 248 aaKnown RBP2.92□□□□□ -1.94
LSM5-205ENST00000409952 COL8A2P25067 703 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 POLR2HP52434 150 aaKnown RBP2.92□□□□□ -1.94
LSM5-205ENST00000409952 YPEL3P61236 119 aaPredicted RBP2.92□□□□□ -1.94
LSM5-205ENST00000409952 ZNF141Q15928 474 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 LYPD6Q86Y78 171 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 OR4D11Q8NGI4 311 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 ISOC1Q96CN7 298 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 RTL8AQ9BWD3 113 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 TMEM133Q9H2Q1 129 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 LAMTOR2Q9Y2Q5 125 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 COL18A1P39060 1754 aa2.92□□□□□ -1.94
LSM5-205ENST00000409952 TRIP11Q15643 1979 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 IGLV4-60A0A075B6I1 120 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 IGKV2D-24A0A075B6R9 120 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 A0A0J9YW62 118 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 A0A1W2PQD3 144 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 ZNF860A6NHJ4 632 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 COLCA2A8K830 154 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 C1orf196B1AJZ1 125 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 H3BPC8 53 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 RPL36A-HNRNPH2H7BZ11 118 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 J3KT08 172 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 K7EM74 188 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 TAX1BP3O14907 124 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 GPX2P18283 190 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 LINC01554Q52M75 96 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 FKBP1CQ5VVH2 108 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 TMEM136Q6ZRR5 245 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 TRAPPC6BQ86SZ2 158 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 CROCCP2Q86T23 111 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 C10orf126Q8N4M7 172 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 TERB2Q8NHR7 220 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 GPX7Q96SL4 187 aaPredicted RBP2.91□□□□□ -1.94
LSM5-205ENST00000409952 TXNL4BQ9NX01 149 aaKnown RBP2.91□□□□□ -1.94
LSM5-205ENST00000409952 PCM1Q15154 2024 aa2.91□□□□□ -1.94
LSM5-205ENST00000409952 NCAPD3P42695 1498 aa2.9□□□□□ -1.94
LSM5-205ENST00000409952 ZCCHC11Q5TAX3 1644 aaKnown RBP2.9□□□□□ -1.94
LSM5-205ENST00000409952 NUP205Q92621 2012 aa2.9□□□□□ -1.94
LSM5-205ENST00000409952 MAPKBP1O60336 1514 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 BORCS7-ASMTA0A0B4J1R7 106 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 A0A1B0GX51 115 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 TMEM235A6NFC5 223 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 TP53I11O14683 189 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 ZNF22P17026 224 aaPredicted RBP2.9□□□□□ -1.95
LSM5-205ENST00000409952 RPS3P23396 243 aaKnown RBP eCLIP2.9□□□□□ -1.95
LSM5-205ENST00000409952 NFYBP25208 207 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 PSMB8P28062 276 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 CCR2P41597 374 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 AKR1C3P42330 323 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 AGTRAPQ6RW13 159 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 BPIFA4PQ86YQ2 179 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 ZNF561Q8N587 486 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 OR52R1Q8NGF1 315 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 OR51T1Q8NGJ9 327 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms