RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 FBXL7Q9UJT9 491 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 ICE1Q9Y2F5 2266 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 IGKV1D-13A0A0B4J2D9 117 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 CXCL1P09341 107 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 IGKV1-13P0DP09 117 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 PAQR4Q8N4S7 273 aaPredicted RBP10.87□□□□□ -0.67
RNF43-201ENST00000407977 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 ZNF638Q14966 1978 aaKnown RBP10.87□□□□□ -0.67
RNF43-201ENST00000407977 SPTBP11277 2137 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 AGMATQ9BSE5 352 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 ASXL3Q9C0F0 2248 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 TCRBV4S1A1TA0A5B7 111 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 GAS1P54826 345 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 GAGE13Q4V321 117 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 SAMD5Q5TGI4 173 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 IFI27L1Q96BM0 104 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 IGHV3OR16-12A0A075B7B8 117 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 F2Z2F3 143 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 LYPD3O95274 346 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 EFNB3Q15768 340 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 ZNF497Q6ZNH5 498 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 FGF11Q92914 225 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 FBXL15Q9H469 300 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 CYSLTR1Q9Y271 337 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 SPAARA0A1B0GVQ0 90 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 IGKCP01834 107 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 PIMREGQ9BSJ6 248 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 IGKV1-9A0A0C4DH69 117 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 PLNP26678 52 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 CD69Q07108 199 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 TRBV7-9A0A0J9YWB2 115 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 A0A1W2PR77 199 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 FAM166AQ6J272 317 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 SLC25A48Q6ZT89 311 aaKnown RBP10.86□□□□□ -0.67
RNF43-201ENST00000407977 PPP1R32Q7Z5V6 425 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 NEUROG3Q9Y4Z2 214 aa10.86□□□□□ -0.67
RNF43-201ENST00000407977 DICER1Q9UPY3 1922 aaKnown RBP10.86□□□□□ -0.67
RNF43-201ENST00000407977 UNC13CQ8NB66 2214 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 CECR9P0C854 216 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 SRSF4Q08170 494 aaKnown RBP10.85□□□□□ -0.67
RNF43-201ENST00000407977 CABIN1Q9Y6J0 2220 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 TUBGCP6Q96RT7 1819 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 PSMB11A5LHX3 300 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 TRGV3P03979 118 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 IFI27P40305 119 aaPredicted RBP10.85□□□□□ -0.67
RNF43-201ENST00000407977 PRCDQ00LT1 54 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 Q5PR19 223 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 WBP1Q96G27 269 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 GFI1Q99684 422 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 APOBEC3AP31941 199 aaPredicted RBP10.85□□□□□ -0.67
RNF43-201ENST00000407977 ARPC1AQ92747 370 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 MRPL20Q9BYC9 149 aaKnown RBP10.85□□□□□ -0.67
RNF43-201ENST00000407977 SAA1P0DJI8 122 aaPredicted RBP10.85□□□□□ -0.67
RNF43-201ENST00000407977 PSG7Q13046 419 aa10.85□□□□□ -0.67
RNF43-201ENST00000407977 TMEM95Q3KNT9 176 aa10.84□□□□□ -0.67
RNF43-201ENST00000407977 RNF182Q8N6D2 247 aa10.84□□□□□ -0.67
RNF43-201ENST00000407977 VKORC1Q9BQB6 163 aa10.84□□□□□ -0.67
RNF43-201ENST00000407977 IGLV3-32A0A0A0MS00 114 aa10.84□□□□□ -0.67
RNF43-201ENST00000407977 NKX2-8O15522 239 aa10.84□□□□□ -0.67
RNF43-201ENST00000407977 NUDT10Q8NFP7 164 aa10.84□□□□□ -0.67
RNF43-201ENST00000407977 PSG8Q9UQ74 426 aa10.84□□□□□ -0.67
RNF43-201ENST00000407977 TRAV8-4A0A0B4J246 113 aa10.84□□□□□ -0.67
RNF43-201ENST00000407977 PAX2Q02962 417 aa10.84□□□□□ -0.67
RNF43-201ENST00000407977 ACTL10Q5JWF8 245 aa10.84□□□□□ -0.67
RNF43-201ENST00000407977 GATA2P23769 480 aaPredicted RBP10.84□□□□□ -0.67
RNF43-201ENST00000407977 PYY3Q5JQD4 70 aa10.83□□□□□ -0.67
RNF43-201ENST00000407977 GZMBP10144 247 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 GFI1BQ5VTD9 330 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 LINC01551Q86U37 167 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 PPP1R27Q86WC6 154 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 C11orf68Q9H3H3 251 aaKnown RBP10.83□□□□□ -0.68
RNF43-201ENST00000407977 SPANXA1Q9NS26 97 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 GAGE2BQ13066 116 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 GAGE2EQ4V326 116 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 MRPL27Q9P0M9 148 aaKnown RBP10.83□□□□□ -0.68
RNF43-201ENST00000407977 GAGE2DQ9UEU5 116 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 TGFBR3LH3BV60 316 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 EFEMP2O95967 443 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 FTH1P19P0C7X4 201 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 COL24A1Q17RW2 1714 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 MORN2Q502X0 79 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 IGHV3-35A0A0C4DH35 117 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 C9orf172C9J069 976 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 RNF125Q96EQ8 232 aa10.83□□□□□ -0.68
RNF43-201ENST00000407977 SAA2-SAA4A0A096LPE2 208 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 IGHV2OR16-5A0A0B4J2B6 119 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 SAA2P0DJI9 122 aaPredicted RBP10.82□□□□□ -0.68
RNF43-201ENST00000407977 PDLIM4P50479 330 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 RIPPLY3P57055 190 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 UBE2V1Q13404 147 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 CHTOPQ9Y3Y2 248 aaKnown RBP10.82□□□□□ -0.68
RNF43-201ENST00000407977 MYO16Q9Y6X6 1858 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 TRAV21A0A0B4J279 112 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 ZNF815PA8K554 130 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 CD55P08174 381 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 RFPL3SP0C7P2 107 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 GNG5P63218 68 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 ZFAND6Q6FIF0 208 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 FAM216BQ8N7L0 139 aa10.82□□□□□ -0.68
RNF43-201ENST00000407977 PRR32B1ATL7 298 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms