RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 CD3DP04234 171 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 IGKV1D-39P04432 117 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 CTSDP07339 412 aaPredicted RBP9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 MFAP2P55001 183 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 UCP3P55916 312 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 MRGPRFQ96AM1 343 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 QTRT1Q9BXR0 403 aaKnown RBP9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 SLIRPQ9GZT3 109 aaKnown RBP9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 VPS13DQ5THJ4 4388 aa9.02□□□□□ -0.97
APOBEC3B-204ENST00000407298 DNAH6Q9C0G6 4158 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 CD74P04233 296 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 LPAR6P43657 344 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 TSPAN5P62079 268 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 PAFAH1B2P68402 229 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 SLC25A24Q6NUK1 477 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 TBC1D26Q86UD7 250 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 APRG1Q8IVJ8 170 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 CMTM1Q8IZ96 169 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 GDPD1Q8N9F7 314 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 C21orf62Q9NYP8 219 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 APLNQ9ULZ1 77 aa9.01□□□□□ -0.97
APOBEC3B-204ENST00000407298 DBX1A6NMT0 343 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 GABARAPH6UMI1 98 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 RGS5O15539 181 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 CD5P06127 495 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 PI3P19957 117 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 G6PCP35575 357 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 RELQ04864 619 aaPredicted RBP9□□□□□ -0.97
APOBEC3B-204ENST00000407298 TMEM187Q14656 261 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 RNASE10Q5GAN6 216 aaKnown RBP9□□□□□ -0.97
APOBEC3B-204ENST00000407298 CADM3Q8N126 398 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 ARRDC1Q8N5I2 433 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 DMBX1Q8NFW5 382 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 OR10W1Q8NGF6 305 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 SMIM4Q8WVI0 70 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 HRH4Q9H3N8 390 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 FAM212BQ9NTI7 297 aaPredicted RBP9□□□□□ -0.97
APOBEC3B-204ENST00000407298 SMPXQ9UHP9 88 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 NSG2Q9Y328 171 aa9□□□□□ -0.97
APOBEC3B-204ENST00000407298 TEX50A0A1B0GTY4 177 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 J3QL48 77 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 CA1P00915 261 aaPredicted RBP8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 KRASP01116 189 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 SERPINE2P07093 398 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 TRAPPC2P0DI81 140 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 TRAPPC2BP0DI82 140 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 OR13C7P0DN81 318 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 TBPP20226 339 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 PPP5CP53041 499 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 RND3P61587 244 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 WT1-ASQ06250 92 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 FAAP20Q6NZ36 180 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 TMEM229BQ8NBD8 167 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 TMEM116Q8NCL8 245 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 SEC22AQ96IW7 307 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 RHPN1-AS1Q9BWJ2 59 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 NXF2Q9GZY0 626 aaKnown RBP8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 RBM38Q9H0Z9 239 aaKnown RBP8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 NDUFA4L2Q9NRX3 87 aa8.99□□□□□ -0.97
APOBEC3B-204ENST00000407298 IGHV7-4-1A0A0J9YVY3 117 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 CTDSPLO15194 276 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 NUPL2O15504 423 aaKnown RBP8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 ZNF207O43670 478 aaKnown RBP8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 P0C879 139 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 TAS2R19P59542 299 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 ERVK-16P61578 105 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 SSBP1Q04837 148 aaKnown RBP8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 Q56UQ5 140 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 TMEM41BQ5BJD5 291 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 LPCAT3Q6P1A2 487 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 OR1L8Q8NGR8 309 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 C15orf40Q8WUR7 153 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 RNF2Q99496 336 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 SOSTQ9BQB4 213 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 CHRDL1Q9BU40 450 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 TMEM14BQ9NUH8 114 aa8.98□□□□□ -0.97
APOBEC3B-204ENST00000407298 TRAV10A0A0B4J240 114 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 C15orf61A6NNL5 157 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 CHEK1O14757 476 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 DFFBO76075 338 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 TFPI2P48307 235 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 MRPS10P82664 201 aaKnown RBP8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 STEAP1BQ6NZ63 245 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 UBAC2Q8NBM4 344 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 OR13C8Q8NGS7 320 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 SCARB1Q8WTV0 552 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 ZNF486Q96H40 463 aaPredicted RBP8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 DIRAS2Q96HU8 199 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 TP53RKQ96S44 253 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 OR51B2Q9Y5P1 312 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 F11RQ9Y624 299 aaKnown RBP8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 MUC4Q99102 2169 aa8.97□□□□□ -0.97
APOBEC3B-204ENST00000407298 PKHD1P08F94 4074 aa8.96□□□□□ -0.97
APOBEC3B-204ENST00000407298 IGHV3OR16-8A0A075B7F1 116 aa8.96□□□□□ -0.98
APOBEC3B-204ENST00000407298 TRAV14DV4A0A0A6YYC5 116 aa8.96□□□□□ -0.98
APOBEC3B-204ENST00000407298 DNASE2O00115 360 aaPredicted RBP8.96□□□□□ -0.98
APOBEC3B-204ENST00000407298 DEFB4AO15263 64 aa8.96□□□□□ -0.98
APOBEC3B-204ENST00000407298 YIF1AO95070 293 aa8.96□□□□□ -0.98
APOBEC3B-204ENST00000407298 RAB3DO95716 219 aa8.96□□□□□ -0.98
APOBEC3B-204ENST00000407298 IGKV1-5P01602 117 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms