RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 ACP7Q6ZNF0 438 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 FAM169BQ8N8A8 192 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 NUP35Q8NFH5 326 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 IGHV5-51A0A0C4DH38 117 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 HBBP68871 147 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 EFNB3Q15768 340 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 C3AR1Q16581 482 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 C1orf53Q5VUE5 145 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 GALMQ96C23 342 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 LINC00470Q9BZP3 86 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 SCRT2Q9NQ03 307 aa11.66□□□□□ -0.54
DUSP28-202ENST00000405954 NPIPB13A6NJU9 1138 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 NPIPB4C9JG80 1138 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 APOMO95445 188 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 C20orf204Q6ZNR8 217 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 WFDC3Q8IUB2 231 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 BOD1L2Q8IYS8 172 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 CYSLTR1Q9Y271 337 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 PPIFP30405 207 aaKnown RBP11.65□□□□□ -0.54
DUSP28-202ENST00000405954 FCGR2BP31994 310 aaPredicted RBP11.65□□□□□ -0.54
DUSP28-202ENST00000405954 OPRK1P41145 380 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 SHISA2Q6UWI4 295 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 VKORC1L1Q8N0U8 176 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 GNG12Q9UBI6 72 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 DCHS1Q96JQ0 3298 aa11.65□□□□□ -0.54
DUSP28-202ENST00000405954 H3BMG7 143 aa11.65□□□□□ -0.55
DUSP28-202ENST00000405954 K7ERJ3 54 aa11.65□□□□□ -0.55
DUSP28-202ENST00000405954 APOHP02749 345 aaPredicted RBP11.65□□□□□ -0.55
DUSP28-202ENST00000405954 Q6ZPA2 131 aa11.65□□□□□ -0.55
DUSP28-202ENST00000405954 BCL6BQ8N143 479 aaPredicted RBP11.65□□□□□ -0.55
DUSP28-202ENST00000405954 C17orf98A8MV24 154 aa11.64□□□□□ -0.55
DUSP28-202ENST00000405954 VSTM5A8MXK1 200 aa11.64□□□□□ -0.55
DUSP28-202ENST00000405954 IGKV3-11P04433 115 aa11.64□□□□□ -0.55
DUSP28-202ENST00000405954 PCBD1P61457 104 aa11.64□□□□□ -0.55
DUSP28-202ENST00000405954 CRIP3Q6Q6R5 217 aa11.64□□□□□ -0.55
DUSP28-202ENST00000405954 TREML4Q6UXN2 200 aa11.64□□□□□ -0.55
DUSP28-202ENST00000405954 REPIN1Q9BWE0 567 aaKnown RBP11.64□□□□□ -0.55
DUSP28-202ENST00000405954 CHRNA10Q9GZZ6 450 aa11.64□□□□□ -0.55
DUSP28-202ENST00000405954 DSPP15924 2871 aaKnown RBP11.64□□□□□ -0.55
DUSP28-202ENST00000405954 TNRC18O15417 2968 aaPredicted RBP11.64□□□□□ -0.55
DUSP28-202ENST00000405954 NEGR1Q7Z3B1 354 aa11.64□□□□□ -0.55
DUSP28-202ENST00000405954 SNRNP40Q96DI7 357 aaKnown RBP11.64□□□□□ -0.55
DUSP28-202ENST00000405954 GGTLC1Q9BX51 225 aa11.64□□□□□ -0.55
DUSP28-202ENST00000405954 AMMECR1Q9Y4X0 333 aaPredicted RBP11.64□□□□□ -0.55
DUSP28-202ENST00000405954 P01737 135 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 SYT8Q8NBV8 401 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 RAB1CQ92928 201 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 TMUB1Q9BVT8 246 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 UFC1Q9Y3C8 167 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 CLPSP04118 112 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 LINC00205P59089 165 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 GAGE13Q4V321 117 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 ZADH2Q8N4Q0 377 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 TAAR6Q96RI8 345 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 H3BVH4 76 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 NGFP01138 241 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 SLC25A5P05141 298 aaKnown RBP11.63□□□□□ -0.55
DUSP28-202ENST00000405954 NEU4Q8WWR8 484 aaPredicted RBP11.63□□□□□ -0.55
DUSP28-202ENST00000405954 DLL3Q9NYJ7 618 aa11.63□□□□□ -0.55
DUSP28-202ENST00000405954 EFNA2O43921 213 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 GABRG2P18507 467 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 COL8A2P25067 703 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 SUMO3P55854 103 aaPredicted RBP11.62□□□□□ -0.55
DUSP28-202ENST00000405954 FXYD7P58549 80 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 CACNG7P62955 275 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 PLP2Q04941 152 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 PCSK4Q6UW60 755 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 ZNF418Q8TF45 676 aaPredicted RBP11.62□□□□□ -0.55
DUSP28-202ENST00000405954 RNF183Q96D59 192 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 FOXB1Q99853 325 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 K7EMI3 77 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 GRPP07492 148 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 EDDM3AQ14507 147 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 ZNF479Q96JC4 524 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 MGST2Q99735 147 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 VGLL1Q99990 258 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 COLQQ9Y215 455 aaPredicted RBP11.62□□□□□ -0.55
DUSP28-202ENST00000405954 FER1L5A0AVI2 2057 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 LOC107984156A0A0G2JMH3 177 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 SPATA46Q5T0L3 261 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 ARL17AQ8IVW1 177 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 PRRG4Q9BZD6 226 aa11.62□□□□□ -0.55
DUSP28-202ENST00000405954 PI4KAP42356 2102 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 SLC23A3Q6PIS1 610 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 H1FXQ92522 213 aaKnown RBP11.61□□□□□ -0.55
DUSP28-202ENST00000405954 NABP2Q9BQ15 211 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 ZNF716A6NP11 495 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 PLAUP00749 431 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 NRN1LQ496H8 165 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 UFSP1Q6NVU6 142 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 OR4X2Q8NGF9 303 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 GRAMD2BQ96HH9 432 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 FZR1Q9UM11 496 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 PRSS1P07477 247 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 NTF4P34130 210 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 FAM27BQ5VT28 67 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 TEX29Q8N6K0 151 aa11.61□□□□□ -0.55
DUSP28-202ENST00000405954 CHCHD1Q96BP2 118 aaKnown RBP11.61□□□□□ -0.55
DUSP28-202ENST00000405954 PRDM6Q9NQX0 595 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms