RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 CRYBB3P26998 211 aa12.36□□□□□ -0.43
ATG4B-206ENST00000405546 RPEL1Q2QD12 228 aa12.36□□□□□ -0.43
ATG4B-206ENST00000405546 SSBP4Q9BWG4 385 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-206ENST00000405546 CLEC5AQ9NY25 188 aa12.36□□□□□ -0.43
ATG4B-206ENST00000405546 BET1LQ9NYM9 111 aa12.36□□□□□ -0.43
ATG4B-206ENST00000405546 COX11Q9Y6N1 276 aa12.36□□□□□ -0.43
ATG4B-206ENST00000405546 MUC6Q6W4X9 2439 aa12.36□□□□□ -0.43
ATG4B-206ENST00000405546 RIPPLY3P57055 190 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 ZNF474Q6S9Z5 364 aaPredicted RBP12.35□□□□□ -0.43
ATG4B-206ENST00000405546 KIR3DL3Q8N743 410 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 MS4A5Q9H3V2 200 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 TLN1Q9Y490 2541 aaKnown RBP12.35□□□□□ -0.43
ATG4B-206ENST00000405546 TRGV10A0A0A0MS01 117 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 FAM216BQ8N7L0 139 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 SLC25A15Q9Y619 301 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 ATMQ13315 3056 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 PMS2P5A8MQ11 134 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 SRRM5B3KS81 715 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 C15orf65H3BRN8 121 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 CTRLP40313 264 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 RNASEKQ6P5S7 137 aaKnown RBP12.35□□□□□ -0.43
ATG4B-206ENST00000405546 ZNF439Q8NDP4 499 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 PMCHL2Q9BQD1 86 aa12.35□□□□□ -0.43
ATG4B-206ENST00000405546 SPTAN1Q13813 2472 aaKnown RBP12.34□□□□□ -0.43
ATG4B-206ENST00000405546 CA2P00918 260 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 REG1BP48304 166 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 CAMPP49913 170 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 PRR27Q6MZM9 219 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 ZNF841Q6ZN19 808 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 STPG3Q8N7X2 389 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 C1orf162Q8NEQ5 155 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-206ENST00000405546 PRR7Q8TB68 274 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 H1FXQ92522 213 aaKnown RBP12.34□□□□□ -0.43
ATG4B-206ENST00000405546 GAL3ST2Q9H3Q3 398 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 TCF19Q9Y242 345 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 WASHC3Q9Y3C0 194 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 TIMM9Q9Y5J7 89 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 MPV17L2Q567V2 206 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 NAA38Q9BRA0 125 aaKnown RBP12.34□□□□□ -0.43
ATG4B-206ENST00000405546 KCNIP2Q9NS61 270 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 ARL2-SNX15V9GYD0 113 aa12.34□□□□□ -0.43
ATG4B-206ENST00000405546 SMG1Q96Q15 3661 aaKnown RBP12.33□□□□□ -0.43
ATG4B-206ENST00000405546 OR2T8A6NH00 312 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 LGALS4P56470 323 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 STUMQ69YW2 141 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 SLC24A4Q8NFF2 622 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 FAM216AQ8WUB2 273 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 TECRQ9NZ01 308 aaKnown RBP12.33□□□□□ -0.44
ATG4B-206ENST00000405546 AKAP13Q12802 2813 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 A8MXE2 369 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 CENPWQ5EE01 88 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 SEM1Q6ZVN7 128 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 NIT1Q86X76 327 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 LINC00479Q96M42 142 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 JPT1Q9UK76 154 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 K7EM74 188 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 ZNF324O75467 553 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-206ENST00000405546 MBNL2Q5VZF2 373 aaKnown RBP12.33□□□□□ -0.44
ATG4B-206ENST00000405546 TRAT1Q6PIZ9 186 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 TREML4Q6UXN2 200 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 OR4S2Q8NH73 311 aa12.33□□□□□ -0.44
ATG4B-206ENST00000405546 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 SPENQ96T58 3664 aaKnown RBP12.32□□□□□ -0.44
ATG4B-206ENST00000405546 HSBP1O75506 76 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 IGLL1P15814 213 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 TNXAQ16473 311 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 CT45A1Q5HYN5 189 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 OR4A47Q6IF82 309 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 CT45A3Q8NHU0 189 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 SLC35D1Q9NTN3 355 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 RNF7Q9UBF6 113 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 SAA2-SAA4A0A096LPE2 208 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 ZNF891A8MT65 544 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-206ENST00000405546 IGHV3-48P01763 117 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 SAA2P0DJI9 122 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-206ENST00000405546 TNFSF4P23510 183 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 RAB31Q13636 194 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 AARDQ4LEZ3 155 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 TSKUQ8WUA8 353 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 FAM168AQ92567 244 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 EAF1Q96JC9 268 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-206ENST00000405546 KCNS1Q96KK3 526 aa12.32□□□□□ -0.44
ATG4B-206ENST00000405546 AKAP6Q13023 2319 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 NPY1RP25929 384 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 BPIFB3P59826 476 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 RPL8P62917 257 aaKnown RBP12.31□□□□□ -0.44
ATG4B-206ENST00000405546 MOB3BQ86TA1 216 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 Q8TCH9 128 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 ORAOV1Q8WV07 137 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 CCL17Q92583 94 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 NEUROG1Q92886 237 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 WDR83OSQ9Y284 106 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 COL6A6A6NMZ7 2263 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 SPTBN1Q01082 2364 aaKnown RBP12.31□□□□□ -0.44
ATG4B-206ENST00000405546 hDV102S1A0JD36 115 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 M0R2Z0 102 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 BMPR1BO00238 502 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 IGLV1-44P01699 117 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 GLRXP35754 106 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 GNG4P50150 75 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms