RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 M0QZK8 103 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 TNFRSF1AP19438 455 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 RAB4AP20338 218 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 USF1P22415 310 aaPredicted RBP8.73□□□□□ -1.01
CLIP4-204ENST00000404424 GATA2P23769 480 aaPredicted RBP8.73□□□□□ -1.01
CLIP4-204ENST00000404424 CD40P25942 277 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 BRS3P32247 399 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 RPL8P62917 257 aaKnown RBP8.73□□□□□ -1.01
CLIP4-204ENST00000404424 TMEM177Q53S58 311 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 IBA57Q5T440 356 aaKnown RBP8.73□□□□□ -1.01
CLIP4-204ENST00000404424 OR5AN1Q8NGI8 311 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 OR4A5Q8NH83 315 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 VSTM2AQ8TAG5 236 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 IGF2BP2-AS1Q96M15 143 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 HARBI1Q96MB7 349 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 SPAARA0A1B0GVQ0 90 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 SMIM27A0A1W2PRY6 76 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 PSMB11A5LHX3 300 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 TCAPO15273 167 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 IGLV2-8P01709 118 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 HLA-DQA1P01909 254 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 CEACAM8P31997 349 aaPredicted RBP8.73□□□□□ -1.01
CLIP4-204ENST00000404424 TMEM183BQ1AE95 376 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 FAM71F2Q6NXP2 309 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 TMEM136Q6ZRR5 245 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 SIGLECL1Q8N7X8 197 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 OR9G1Q8NH87 305 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 NEU1Q99519 415 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 RNASE7Q9H1E1 156 aaKnown RBP8.73□□□□□ -1.01
CLIP4-204ENST00000404424 DNAJC4Q9NNZ3 241 aa8.73□□□□□ -1.01
CLIP4-204ENST00000404424 H0YJW9 148 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 AMY1AP04745 511 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 COL8A2P25067 703 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 Q6ZS92 163 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 RPRMLQ8N4K4 120 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 OR1L4Q8NGR5 311 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 RND1Q92730 232 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 FLYWCH2Q96CP2 140 aaKnown RBP8.72□□□□□ -1.01
CLIP4-204ENST00000404424 FAM167A-AS1Q96KT0 104 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 MRPL20Q9BYC9 149 aaKnown RBP8.72□□□□□ -1.01
CLIP4-204ENST00000404424 CDC42EP3Q9UKI2 254 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 CRYABP02511 175 aaKnown RBP8.72□□□□□ -1.01
CLIP4-204ENST00000404424 GPX1P07203 203 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 SUB1P53999 127 aaKnown RBP eCLIP8.72□□□□□ -1.01
CLIP4-204ENST00000404424 MLANAQ16655 118 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 OR10W1Q8NGF6 305 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 OR4C13Q8NGP0 309 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 SLC25A2Q9BXI2 301 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 GNB4Q9HAV0 340 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 PARD6AQ9NPB6 346 aa8.72□□□□□ -1.01
CLIP4-204ENST00000404424 RAI1Q7Z5J4 1906 aaPredicted RBP8.71□□□□□ -1.01
CLIP4-204ENST00000404424 CADP27708 2225 aa8.71□□□□□ -1.01
CLIP4-204ENST00000404424 FRMD6-AS1P0C7T7 363 aa8.71□□□□□ -1.01
CLIP4-204ENST00000404424 UBE2L3P68036 154 aaKnown RBP8.71□□□□□ -1.01
CLIP4-204ENST00000404424 FAM27E3Q08E93 113 aa8.71□□□□□ -1.01
CLIP4-204ENST00000404424 RASL11AQ6T310 242 aa8.71□□□□□ -1.01
CLIP4-204ENST00000404424 PDPNQ86YL7 162 aa8.71□□□□□ -1.01
CLIP4-204ENST00000404424 TMEM167AQ8TBQ9 72 aa8.71□□□□□ -1.01
CLIP4-204ENST00000404424 MIEN1Q9BRT3 115 aa8.71□□□□□ -1.01
CLIP4-204ENST00000404424 ZNF586Q9NXT0 402 aa8.71□□□□□ -1.01
CLIP4-204ENST00000404424 IZUMO1RA6ND01 250 aa8.71□□□□□ -1.02
CLIP4-204ENST00000404424 REG1AP05451 166 aa8.71□□□□□ -1.02
CLIP4-204ENST00000404424 MGST1P10620 155 aaKnown RBP8.71□□□□□ -1.02
CLIP4-204ENST00000404424 TDGF1P3P51864 188 aa8.71□□□□□ -1.02
CLIP4-204ENST00000404424 BPIFB3P59826 476 aa8.71□□□□□ -1.02
CLIP4-204ENST00000404424 FXYD3Q14802 87 aa8.71□□□□□ -1.02
CLIP4-204ENST00000404424 TMEM108Q6UXF1 575 aa8.71□□□□□ -1.02
CLIP4-204ENST00000404424 FAM231DQ6ZW35 169 aa8.71□□□□□ -1.02
CLIP4-204ENST00000404424 C8orf31Q8N9H6 132 aa8.71□□□□□ -1.02
CLIP4-204ENST00000404424 TMEM186Q96B77 213 aa8.71□□□□□ -1.02
CLIP4-204ENST00000404424 ZNRD1Q9P1U0 126 aa8.71□□□□□ -1.02
CLIP4-204ENST00000404424 F2Z2F3 143 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 CD33P20138 364 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 CHRNB4P30926 498 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 ZNF705AQ6ZN79 300 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-204ENST00000404424 LINC00311Q8N616 119 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 OR2T6Q8NHC8 308 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 ZNF596Q8TC21 504 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 SNRNP40Q96DI7 357 aaKnown RBP8.7□□□□□ -1.02
CLIP4-204ENST00000404424 KCNS1Q96KK3 526 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 VAMP8Q9BV40 100 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 ZNF430Q9H8G1 570 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-204ENST00000404424 DYSFO75923 2080 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 TCRBV4S1A1TA0A5B7 111 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 C17orf100A8MU93 164 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 COX7A2P2O60397 106 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 CDKN1AP38936 164 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 CCL8P80075 99 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 C10orf113Q5VZT2 155 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 VN1R17PQ8TDU5 208 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 WIPF2Q8TF74 440 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-204ENST00000404424 CHRDL1Q9BU40 450 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 PAXXQ9BUH6 204 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 ZNF331Q9NQX6 463 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-204ENST00000404424 SERTAD4Q9NUC0 356 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 DCAF16Q9NXF7 216 aa8.7□□□□□ -1.02
CLIP4-204ENST00000404424 AMMECR1Q9Y4X0 333 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-204ENST00000404424 TNCP24821 2201 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 SPINK4O60575 86 aa8.69□□□□□ -1.02
CLIP4-204ENST00000404424 ZNF253O75346 499 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms