RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 SNCAP37840 140 aa13.71□□□□□ -0.21
PTPRN2-204ENST00000404321 SPANXN2Q5MJ10 180 aa13.71□□□□□ -0.21
PTPRN2-204ENST00000404321 BTNL8Q6UX41 500 aa13.71□□□□□ -0.21
PTPRN2-204ENST00000404321 ZNF114Q8NC26 417 aa13.71□□□□□ -0.21
PTPRN2-204ENST00000404321 OR2K2Q8NGT1 345 aa13.71□□□□□ -0.21
PTPRN2-204ENST00000404321 GPR146Q96CH1 333 aa13.71□□□□□ -0.21
PTPRN2-204ENST00000404321 CACNG5Q9UF02 275 aa13.71□□□□□ -0.21
PTPRN2-204ENST00000404321 MLXQ9UH92 298 aa13.71□□□□□ -0.21
PTPRN2-204ENST00000404321 U3KQK5 164 aa13.71□□□□□ -0.21
PTPRN2-204ENST00000404321 ZNF785A8K8V0 405 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 ZNF207O43670 478 aaKnown RBP13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 NXPH3O95157 252 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 ADMP35318 185 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 AP3S2P59780 193 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 TMED4Q7Z7H5 227 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 TMEM61Q8N0U2 210 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 SCGB3A2Q96PL1 93 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 C20orf24Q9BUV8 137 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 ZNF436Q9C0F3 470 aaPredicted RBP13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 PALMDQ9NP74 551 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 ENY2Q9NPA8 101 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 TECRQ9NZ01 308 aaKnown RBP13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 UFC1Q9Y3C8 167 aa13.71□□□□□ -0.22
PTPRN2-204ENST00000404321 CD7P09564 240 aa13.7□□□□□ -0.22
PTPRN2-204ENST00000404321 CD81P60033 236 aa13.7□□□□□ -0.22
PTPRN2-204ENST00000404321 TMEM187Q14656 261 aa13.7□□□□□ -0.22
PTPRN2-204ENST00000404321 ZNF57Q68EA5 555 aaPredicted RBP13.7□□□□□ -0.22
PTPRN2-204ENST00000404321 SPSB3Q6PJ21 355 aa13.7□□□□□ -0.22
PTPRN2-204ENST00000404321 FAM219AQ8IW50 185 aa13.7□□□□□ -0.22
PTPRN2-204ENST00000404321 TMEM190Q8WZ59 177 aa13.7□□□□□ -0.22
PTPRN2-204ENST00000404321 KCNIP3Q9Y2W7 256 aa13.7□□□□□ -0.22
PTPRN2-204ENST00000404321 TMEM56-RWDD3S4R434 201 aa13.7□□□□□ -0.22
PTPRN2-204ENST00000404321 SCAF4O95104 1147 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-204ENST00000404321 CTSGP08311 255 aa13.69□□□□□ -0.22
PTPRN2-204ENST00000404321 MFAP4P55083 255 aa13.69□□□□□ -0.22
PTPRN2-204ENST00000404321 SUPT4H1P63272 117 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-204ENST00000404321 NEURL2Q9BR09 285 aa13.69□□□□□ -0.22
PTPRN2-204ENST00000404321 SRRQ9GZT4 340 aa13.69□□□□□ -0.22
PTPRN2-204ENST00000404321 WFDC10AQ9H1F0 79 aa13.69□□□□□ -0.22
PTPRN2-204ENST00000404321 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.69□□□□□ -0.22
PTPRN2-204ENST00000404321 YIF1AO95070 293 aa13.68□□□□□ -0.22
PTPRN2-204ENST00000404321 RNASE2P10153 161 aaKnown RBP13.68□□□□□ -0.22
PTPRN2-204ENST00000404321 GALNT14Q96FL9 552 aa13.68□□□□□ -0.22
PTPRN2-204ENST00000404321 TUBA4BQ9H853 241 aa13.68□□□□□ -0.22
PTPRN2-204ENST00000404321 C19orf73Q9NVV2 129 aa13.68□□□□□ -0.22
PTPRN2-204ENST00000404321 LINC00854A0A1B0GVQ3 168 aa13.67□□□□□ -0.22
PTPRN2-204ENST00000404321 INS-IGF2F8WCM5 200 aa13.67□□□□□ -0.22
PTPRN2-204ENST00000404321 NDUFA4O00483 81 aa13.67□□□□□ -0.22
PTPRN2-204ENST00000404321 NUPL2O15504 423 aaKnown RBP13.67□□□□□ -0.22
PTPRN2-204ENST00000404321 GNG7O60262 68 aa13.67□□□□□ -0.22
PTPRN2-204ENST00000404321 SPCS3P61009 180 aa13.67□□□□□ -0.22
PTPRN2-204ENST00000404321 LYZL2Q7Z4W2 148 aa13.67□□□□□ -0.22
PTPRN2-204ENST00000404321 DAZ1Q9NQZ3 744 aaKnown RBP13.67□□□□□ -0.22
PTPRN2-204ENST00000404321 CEBPZOSA8MTT3 80 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 C8orf88P0DMB2 117 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 INPP1P49441 399 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 SUB1P53999 127 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 ELLP55199 621 aaPredicted RBP13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 BAK1Q16611 211 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 MLANAQ16655 118 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 AARDQ4LEZ3 155 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 DEFB125Q8N687 156 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 IL22RA2Q969J5 263 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 MARC2Q969Z3 335 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 ZNF414Q96IQ9 312 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 ATP6V0BQ99437 205 aa13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 HEYLQ9NQ87 328 aaPredicted RBP13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 GAR1Q9NY12 217 aaKnown RBP13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 MRPL27Q9P0M9 148 aaKnown RBP13.66□□□□□ -0.22
PTPRN2-204ENST00000404321 HUWE1Q7Z6Z7 4374 aaKnown RBP13.65□□□□□ -0.22
PTPRN2-204ENST00000404321 IGHV3-49A0A0A0MS15 119 aa13.65□□□□□ -0.22
PTPRN2-204ENST00000404321 ANXA3P12429 323 aa13.65□□□□□ -0.22
PTPRN2-204ENST00000404321 VAMP1P23763 118 aa13.65□□□□□ -0.22
PTPRN2-204ENST00000404321 TRIQKQ629K1 86 aa13.65□□□□□ -0.22
PTPRN2-204ENST00000404321 RBPMS2Q6ZRY4 209 aaKnown RBP13.65□□□□□ -0.22
PTPRN2-204ENST00000404321 WWC2-AS2Q96NR7 200 aa13.65□□□□□ -0.22
PTPRN2-204ENST00000404321 RCHY1Q96PM5 261 aa13.65□□□□□ -0.22
PTPRN2-204ENST00000404321 TXN2Q99757 166 aa13.65□□□□□ -0.22
PTPRN2-204ENST00000404321 A8MZ25 164 aa13.64□□□□□ -0.23
PTPRN2-204ENST00000404321 SULT1A3P0DMM9 295 aa13.64□□□□□ -0.23
PTPRN2-204ENST00000404321 SULT1A4P0DMN0 295 aa13.64□□□□□ -0.23
PTPRN2-204ENST00000404321 OPRK1P41145 380 aa13.64□□□□□ -0.23
PTPRN2-204ENST00000404321 CCR6P51684 374 aa13.64□□□□□ -0.23
PTPRN2-204ENST00000404321 RELQ04864 619 aaPredicted RBP13.64□□□□□ -0.23
PTPRN2-204ENST00000404321 LGI3Q8N145 548 aa13.64□□□□□ -0.23
PTPRN2-204ENST00000404321 DUSP18Q8NEJ0 188 aa13.64□□□□□ -0.23
PTPRN2-204ENST00000404321 OR52E5Q8NH55 327 aa13.64□□□□□ -0.23
PTPRN2-204ENST00000404321 MRPL36Q9P0J6 103 aaKnown RBP13.64□□□□□ -0.23
PTPRN2-204ENST00000404321 A0A0B4J2A0 478 aa13.63□□□□□ -0.23
PTPRN2-204ENST00000404321 OR11H12B2RN74 326 aa13.63□□□□□ -0.23
PTPRN2-204ENST00000404321 FCGR2BP31994 310 aaPredicted RBP13.63□□□□□ -0.23
PTPRN2-204ENST00000404321 NMSQ5H8A3 153 aa13.63□□□□□ -0.23
PTPRN2-204ENST00000404321 PVRIGQ6DKI7 326 aa13.63□□□□□ -0.23
PTPRN2-204ENST00000404321 OR52B4Q8NGK2 314 aa13.63□□□□□ -0.23
PTPRN2-204ENST00000404321 SDHCQ99643 169 aaPredicted RBP13.63□□□□□ -0.23
PTPRN2-204ENST00000404321 SLC25A21Q9BQT8 299 aaPredicted RBP13.63□□□□□ -0.23
PTPRN2-204ENST00000404321 FNDC4Q9H6D8 234 aaPredicted RBP13.63□□□□□ -0.23
PTPRN2-204ENST00000404321 SHPKQ9UHJ6 478 aa13.63□□□□□ -0.23
PTPRN2-204ENST00000404321 STAB2Q8WWQ8 2551 aa13.62□□□□□ -0.23
PTPRN2-204ENST00000404321 IGHV3OR16-13A0A075B7E8 117 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms