RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TRAV41A0A0B4J266 112 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 TRAV4A0A0B4J268 109 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 MUC21A0A0G2JKD1 596 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 MUC21A0A140T8X8 626 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 SIGLEC16A6NMB1 481 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 PPP5D1E7EU14 171 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 J3QRK9 145 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 OVOL1O14753 267 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 NDUFC2O95298 119 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 IFNA7P01567 189 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 PPBPP02775 128 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 IFI30P13284 250 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 SPI1P17947 270 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 S100A4P26447 101 aaKnown RBP1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 CASP1P29466 404 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 PHBP35232 272 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 G6PCP35575 357 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 ATP5G3P48201 142 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 EIF2B2P49770 351 aaKnown RBP1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 EMP1P54849 157 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 CDC42P60953 191 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 GNG5P63218 68 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 LYRM7Q5U5X0 104 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 AGTRAPQ6RW13 159 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 LYZL1Q6UWQ5 148 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 BPIFA4PQ86YQ2 179 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 STX19Q8N4C7 294 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 OR4X2Q8NGF9 303 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 RNASE11Q8TAA1 199 aaKnown RBP1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 DNAJC9Q8WXX5 260 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 C2orf50Q96LR7 162 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 PBDC1Q9BVG4 233 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 SLC39A9Q9NUM3 307 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 PSORS1C2Q9UIG4 136 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 SSR3Q9UNL2 185 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 HHLA3Q9XRX5 114 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 SLIT2O94813 1529 aa1.61□□□□□ -2.15
HMGB1P17-201ENST00000403495 ANKRD30AQ9BXX3 1397 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 SYNMO15061 1565 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 TRBV19A0A075B6N1 114 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 TRAV7A0A075B6U4 112 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 GNG14A0A1W2PPG7 69 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 TRAPPC2LH3BP13 241 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 BUB1B-PAK6H3BSN5 160 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 H7C1C5 153 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 AIPO00170 330 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 SLC22A1O15245 554 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 MFSD11O43934 449 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 OR2J2O76002 312 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 IDO1P14902 403 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 RPS4Y1P22090 263 aaKnown RBP1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 PEBP1P30086 187 aaKnown RBP1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 EVX1P49640 407 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 HINT1P49773 126 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 ZNF80P51504 273 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 PIGPP57054 158 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 LCN6P62502 163 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 PABPC1L2AQ5JQF8 200 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 GRINAQ7Z429 371 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 CLVS1Q8IUQ0 354 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 DYNAPQ8N1N2 210 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 RASSF5Q8WWW0 418 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 MRPS24Q96EL2 167 aaKnown RBP1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 SCGB3A1Q96QR1 104 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 GPER1Q99527 375 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 TXNDC17Q9BRA2 123 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 SH3BGRL3Q9H299 93 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 ACER3Q9NUN7 267 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 SMPXQ9UHP9 88 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 ERGIC3Q9Y282 383 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 ITGB4P16144 1822 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 PBRM1Q86U86 1689 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 NAV1Q8NEY1 1877 aa1.6□□□□□ -2.15
HMGB1P17-201ENST00000403495 MYO9BQ13459 2157 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 RFPL4AA6NLU0 287 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 C1orf196B1AJZ1 125 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 RFPL4AL1F8VTS6 287 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 H7C2G1 150 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 GPR31O00270 319 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 BANF1O75531 89 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 IFNA21P01568 189 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 CRHP06850 196 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 DEFA4P12838 97 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 NFYAP23511 347 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 DEFB103AP81534 67 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 TFAMQ00059 246 aaKnown RBP1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 ZNF90Q03938 601 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 KISS1Q15726 138 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 LCA10Q71F78 164 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 MIR17HGQ75NE6 70 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 TRAPPC6BQ86SZ2 158 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 TAC4Q86UU9 113 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 RPP25LQ8N5L8 163 aaKnown RBP1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 ZNF439Q8NDP4 499 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 Q8NDZ9 215 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 TERB2Q8NHR7 220 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 DNAJC30Q96LL9 226 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 GINS4Q9BRT9 223 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 TMEM70Q9BUB7 260 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 IMUPQ9GZP8 106 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms