RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 IGKV1OR2-108A0A075B7D4 117 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 YIF1AO95070 293 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 HBE1P02100 147 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 FXYD3Q14802 87 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 MBD6Q96DN6 1003 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 PXMP4Q9Y6I8 212 aa20.36■□□□□ 0.85
CPNE1-205ENST00000401607 NAV3Q8IVL0 2385 aa20.35■□□□□ 0.85
CPNE1-205ENST00000401607 C9JQL5 133 aa20.35■□□□□ 0.85
CPNE1-205ENST00000401607 RNF223E7ERA6 249 aa20.35■□□□□ 0.85
CPNE1-205ENST00000401607 SOX15O60248 233 aa20.35■□□□□ 0.85
CPNE1-205ENST00000401607 EIF3GO75821 320 aaKnown RBP eCLIP20.35■□□□□ 0.85
CPNE1-205ENST00000401607 AVPP01185 164 aa20.35■□□□□ 0.85
CPNE1-205ENST00000401607 M6PRP20645 277 aa20.35■□□□□ 0.85
CPNE1-205ENST00000401607 GATA3P23771 443 aa20.35■□□□□ 0.85
CPNE1-205ENST00000401607 LCN15Q6UWW0 184 aa20.35■□□□□ 0.85
CPNE1-205ENST00000401607 MAPK1IP1LQ8NDC0 245 aa20.35■□□□□ 0.85
CPNE1-205ENST00000401607 OR2T6Q8NHC8 308 aa20.35■□□□□ 0.85
CPNE1-205ENST00000401607 F11RQ9Y624 299 aaKnown RBP20.35■□□□□ 0.85
CPNE1-205ENST00000401607 ACOT6Q3I5F7 207 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-205ENST00000401607 GCSAMLQ5JQS6 135 aa20.34■□□□□ 0.85
CPNE1-205ENST00000401607 Q8N9W7 124 aa20.34■□□□□ 0.85
CPNE1-205ENST00000401607 OR1P1Q8NH06 330 aa20.34■□□□□ 0.85
CPNE1-205ENST00000401607 SLC25A22Q9H936 323 aa20.34■□□□□ 0.85
CPNE1-205ENST00000401607 DMRT1Q9Y5R6 373 aa20.34■□□□□ 0.85
CPNE1-205ENST00000401607 ANKRD17O75179 2603 aaKnown RBP20.34■□□□□ 0.85
CPNE1-205ENST00000401607 A0A0U1RQK1 487 aa20.34■□□□□ 0.85
CPNE1-205ENST00000401607 ADCYAP1P18509 176 aa20.34■□□□□ 0.85
CPNE1-205ENST00000401607 KLF17Q5JT82 389 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-205ENST00000401607 ZNF562Q6V9R5 426 aa20.34■□□□□ 0.85
CPNE1-205ENST00000401607 KRTAP1-3Q8IUG1 177 aa20.34■□□□□ 0.85
CPNE1-205ENST00000401607 SLC35E1Q96K37 410 aa20.34■□□□□ 0.85
CPNE1-205ENST00000401607 FAM103A1Q9BTL3 118 aaKnown RBP20.34■□□□□ 0.85
CPNE1-205ENST00000401607 DOPEY2Q9Y3R5 2298 aa20.33■□□□□ 0.85
CPNE1-205ENST00000401607 PTPN13Q12923 2485 aa20.33■□□□□ 0.85
CPNE1-205ENST00000401607 MAP1LC3B2A6NCE7 125 aa20.33■□□□□ 0.84
CPNE1-205ENST00000401607 DEFA4P12838 97 aa20.33■□□□□ 0.84
CPNE1-205ENST00000401607 CX3CL1P78423 397 aa20.33■□□□□ 0.84
CPNE1-205ENST00000401607 FAM122CQ6P4D5 195 aa20.33■□□□□ 0.84
CPNE1-205ENST00000401607 ABHD5Q8WTS1 349 aa20.33■□□□□ 0.84
CPNE1-205ENST00000401607 MAP1LC3BQ9GZQ8 125 aa20.33■□□□□ 0.84
CPNE1-205ENST00000401607 KCNIP2Q9NS61 270 aa20.33■□□□□ 0.84
CPNE1-205ENST00000401607 CTXND1A0A1B0GTU2 59 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 RPL29P47914 159 aaKnown RBP20.32■□□□□ 0.84
CPNE1-205ENST00000401607 FGF8P55075 233 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-205ENST00000401607 PRR20EP86478 221 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 PRR20CP86479 221 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 PRR20DP86480 221 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 PRR20BP86481 221 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 PRR20AP86496 221 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 NDPQ00604 133 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 RAB31Q13636 194 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 STPG3Q8N7X2 389 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 MEGF9Q9H1U4 602 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 SLC39A9Q9NUM3 307 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 C1RLQ9NZP8 487 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 MRPL36Q9P0J6 103 aaKnown RBP20.32■□□□□ 0.84
CPNE1-205ENST00000401607 SLC45A2Q9UMX9 530 aa20.32■□□□□ 0.84
CPNE1-205ENST00000401607 B2MP61769 119 aa20.31■□□□□ 0.84
CPNE1-205ENST00000401607 MISP3Q96FF7 219 aa20.31■□□□□ 0.84
CPNE1-205ENST00000401607 ACY3Q96HD9 319 aa20.31■□□□□ 0.84
CPNE1-205ENST00000401607 PBDC1Q9BVG4 233 aa20.31■□□□□ 0.84
CPNE1-205ENST00000401607 ACTR3CQ9C0K3 210 aaPredicted RBP20.31■□□□□ 0.84
CPNE1-205ENST00000401607 EIF5A2Q9GZV4 153 aaKnown RBP20.31■□□□□ 0.84
CPNE1-205ENST00000401607 SOX21Q9Y651 276 aaPredicted RBP20.31■□□□□ 0.84
CPNE1-205ENST00000401607 IGHV3-48P01763 117 aa20.31■□□□□ 0.84
CPNE1-205ENST00000401607 CRYGCP07315 174 aa20.31■□□□□ 0.84
CPNE1-205ENST00000401607 CTRB1P17538 263 aa20.31■□□□□ 0.84
CPNE1-205ENST00000401607 CTRB2Q6GPI1 263 aa20.31■□□□□ 0.84
CPNE1-205ENST00000401607 ARPC1AQ92747 370 aa20.31■□□□□ 0.84
CPNE1-205ENST00000401607 SEC14L6B5MCN3 397 aa20.3■□□□□ 0.84
CPNE1-205ENST00000401607 CYB5BO43169 146 aa20.3■□□□□ 0.84
CPNE1-205ENST00000401607 OR10J1P30954 320 aa20.3■□□□□ 0.84
CPNE1-205ENST00000401607 PEA15Q15121 130 aa20.3■□□□□ 0.84
CPNE1-205ENST00000401607 CCDC28AQ8IWP9 274 aa20.3■□□□□ 0.84
CPNE1-205ENST00000401607 RAB24Q969Q5 203 aa20.3■□□□□ 0.84
CPNE1-205ENST00000401607 RARRES2Q99969 163 aa20.3■□□□□ 0.84
CPNE1-205ENST00000401607 POLQO75417 2590 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 RBFOX3A6NFN3 312 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 HMGB3O15347 200 aaKnown RBP20.29■□□□□ 0.84
CPNE1-205ENST00000401607 LINC00869P0C866 280 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 ASPHD1Q5U4P2 390 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 PIFOQ8TCI5 191 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 WNT10AQ9GZT5 417 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 SVEP1Q4LDE5 3571 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 IGHV7-81A0A0B4J1V7 117 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 CORTO00230 105 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 CDC34P49427 236 aaPredicted RBP20.29■□□□□ 0.84
CPNE1-205ENST00000401607 C10orf91Q5T1B1 145 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 PRSS57Q6UWY2 283 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 NPIPB3Q92617 1050 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 Q96MF0 132 aa20.29■□□□□ 0.84
CPNE1-205ENST00000401607 HLA-DRB1P01911 266 aa20.28■□□□□ 0.84
CPNE1-205ENST00000401607 APOC3P02656 99 aa20.28■□□□□ 0.84
CPNE1-205ENST00000401607 SFTA3P0C7M3 94 aa20.28■□□□□ 0.84
CPNE1-205ENST00000401607 IGHV4-31P0DP07 118 aa20.28■□□□□ 0.84
CPNE1-205ENST00000401607 HAGHQ16775 308 aa20.28■□□□□ 0.84
CPNE1-205ENST00000401607 ETFRF1Q6IPR1 90 aa20.28■□□□□ 0.84
CPNE1-205ENST00000401607 SLC25A33Q9BSK2 321 aa20.28■□□□□ 0.84
CPNE1-205ENST00000401607 CR1P17927 2039 aa20.28■□□□□ 0.84
CPNE1-205ENST00000401607 TGFAP01135 160 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms