RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PAX9P55771 341 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 SGMS2Q8NHU3 365 aa11.5□□□□□ -0.57
SCAF4-202ENST00000399804 SRSF12Q8WXF0 261 aaKnown RBP11.5□□□□□ -0.57
SCAF4-202ENST00000399804 TMEM250H0YL14 139 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 CHEK1O14757 476 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 S100A8P05109 93 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 EFNA4P52798 201 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 TNFRSF14Q92956 283 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 CCDC168Q8NDH2 2452 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 PGPA6NDG6 321 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 OR5I1Q13606 314 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 TREML4Q6UXN2 200 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
SCAF4-202ENST00000399804 MS4A10Q96PG2 267 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 H0YJW9 148 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 KLRD1Q13241 179 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 HIST1H2BAQ96A08 127 aa11.49□□□□□ -0.57
SCAF4-202ENST00000399804 FOXA2Q9Y261 457 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-202ENST00000399804 GOSR1O95249 250 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 MFAP4P55083 255 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 TEX36Q5VZQ5 186 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 GSN-AS1Q9NRJ2 163 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 GAR1Q9NY12 217 aaKnown RBP11.48□□□□□ -0.57
SCAF4-202ENST00000399804 TNCP24821 2201 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 SHISA9B4DS77 424 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 FCN1O00602 326 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 ICAM4Q14773 271 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 FUT9Q9Y231 359 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 IGKV3-7A0A075B6H7 116 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 C15orf62A8K5M9 175 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 CD5P06127 495 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
SCAF4-202ENST00000399804 C19orf24Q9BVV8 132 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 OR51M1Q9H341 326 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 ZNF257Q9Y2Q1 563 aa11.48□□□□□ -0.57
SCAF4-202ENST00000399804 ITGB1BP1O14713 200 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 CAMPP49913 170 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 CD69Q07108 199 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 C22orf34Q6ZV56 151 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 MIR17HGQ75NE6 70 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 RNASEH2CQ8TDP1 164 aaKnown RBP11.47□□□□□ -0.57
SCAF4-202ENST00000399804 NBR2O15453 112 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 NTF3P20783 257 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 LOXP28300 417 aaPredicted RBP11.47□□□□□ -0.57
SCAF4-202ENST00000399804 SRP14P37108 136 aaKnown RBP11.47□□□□□ -0.57
SCAF4-202ENST00000399804 ATP5G3P48201 142 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 FAM3BP58499 235 aaPredicted RBP11.47□□□□□ -0.57
SCAF4-202ENST00000399804 RPEL1Q2QD12 228 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 TMEM155Q4W5P6 130 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 TEX45Q8NA69 505 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 SGK494Q96LW2 274 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 WNT10AQ9GZT5 417 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 IGHV1-3A0A0C4DH29 117 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 COLCA2A8K830 154 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 EFNB3Q15768 340 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 LINC00305Q7Z4B0 112 aa11.47□□□□□ -0.57
SCAF4-202ENST00000399804 EAF1Q96JC9 268 aaPredicted RBP11.47□□□□□ -0.57
SCAF4-202ENST00000399804 TNRC6AQ8NDV7 1962 aaKnown RBP11.47□□□□□ -0.57
SCAF4-202ENST00000399804 ELOA3CA0A087WX78 387 aaPredicted RBP11.46□□□□□ -0.57
SCAF4-202ENST00000399804 AP4M1O00189 453 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 OR2J3O76001 311 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 ZNF343Q6P1L6 599 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 SMIM15Q7Z3B0 74 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 NCOR1P1Q9H4R4 102 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 C7orf69Q9H7B7 122 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 LHBP01229 141 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 LOXL3P58215 753 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 MBD3L1Q8WWY6 194 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 AGMATQ9BSE5 352 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 SLC25A33Q9BSK2 321 aa11.46□□□□□ -0.57
SCAF4-202ENST00000399804 XKRY2A2RUG3 117 aa11.46□□□□□ -0.58
SCAF4-202ENST00000399804 PF4V1P10720 104 aa11.46□□□□□ -0.58
SCAF4-202ENST00000399804 MST1LQ2TV78 715 aa11.46□□□□□ -0.58
SCAF4-202ENST00000399804 BPIFA4PQ86YQ2 179 aa11.46□□□□□ -0.58
SCAF4-202ENST00000399804 GGTLC1Q9BX51 225 aa11.46□□□□□ -0.58
SCAF4-202ENST00000399804 Q6ZPA2 131 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 SERTM2A0A1B0GWG4 89 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 IL4P05112 153 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 SMIM6P0DI80 62 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 FABP4P15090 132 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 CTAG1AP78358 180 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 MRPL54Q6P161 138 aaKnown RBP11.45□□□□□ -0.58
SCAF4-202ENST00000399804 COL8A1P27658 744 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
SCAF4-202ENST00000399804 UQCRFS1P47985 274 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 SLC35B1P78383 322 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 PRSS8Q16651 343 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 OR10D4PQ8NGN7 298 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 TMEM167AQ8TBQ9 72 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 TGIF2-C20orf24A0A0A6YYL0 155 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 BUB1B-PAK6H3BSN5 160 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 IGHV3-23P01764 117 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 HIST1H1BP16401 226 aaKnown RBP11.45□□□□□ -0.58
SCAF4-202ENST00000399804 RPL29P47914 159 aaKnown RBP11.45□□□□□ -0.58
SCAF4-202ENST00000399804 SSX7Q7RTT5 188 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 BPESC1Q9GZL8 116 aa11.45□□□□□ -0.58
SCAF4-202ENST00000399804 TRGC2P03986 189 aa11.44□□□□□ -0.58
SCAF4-202ENST00000399804 DEFA6Q01524 100 aa11.44□□□□□ -0.58
SCAF4-202ENST00000399804 MLANAQ16655 118 aa11.44□□□□□ -0.58
SCAF4-202ENST00000399804 NHLRC2Q8NBF2 726 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms