RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GOSR2O14653 212 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 IGHV3-23P01764 117 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 MBPP02686 304 aaPredicted RBP9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 IAPPP10997 89 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 HIST1H1BP16401 226 aaKnown RBP9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 H2BFSP57053 126 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 ERHP84090 104 aaKnown RBP9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 EXOSC2Q13868 293 aaKnown RBP9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 SLC25A24Q6NUK1 477 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 MRPL41Q8IXM3 137 aaKnown RBP9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 C2orf50Q96LR7 162 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 C11orf1Q9H5F2 150 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 FNDC4Q9H6D8 234 aaPredicted RBP9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 HEYLQ9NQ87 328 aaPredicted RBP9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 IGHV4OR15-8A0A075B7B6 117 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 A0A087WW49 117 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 IGHV3-21A0A0B4J1V1 117 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 C5orf51A6NDU8 294 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 C15orf62A8K5M9 175 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 FAM25EA8MYX2 175 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 SYNGR2O43760 224 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 NKX2-1P43699 371 aaPredicted RBP9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 PAX9P55771 341 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 ATP5G2Q06055 141 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 C2orf83Q53S99 150 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 SLC24A4Q8NFF2 622 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 ZNF502Q8TBZ5 544 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 MISP3Q96FF7 219 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 ZNF414Q96IQ9 312 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 OR4C12Q96R67 309 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 ENY2Q9NPA8 101 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 MRPL36Q9P0J6 103 aaKnown RBP9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 GSKIPQ9P0R6 139 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 CACFD1Q9UGQ2 172 aa9.56□□□□□ -0.88
HLA-DQB1-203ENST00000399082 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 ANKRD34BA5PLL1 514 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 CCL24O00175 119 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 BMPR1BO00238 502 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 WRBO00258 174 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 SSNA1O43805 119 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 SCGB1D2O95969 90 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 MT-CO2P00403 227 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 IGHV3-48P01763 117 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 CXCL3P19876 107 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 NPY1RP25929 384 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 SNCAP37840 140 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 HTR2BP41595 481 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 MLANAQ16655 118 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 PRR31Q5SQ13 230 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 GSG1LQ6UXU4 331 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 OR1L6Q8NGR2 347 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 VN1R17PQ8TDU5 208 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 SCARB1Q8WTV0 552 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 MGAT4CQ9UBM8 478 aa9.55□□□□□ -0.88
HLA-DQB1-203ENST00000399082 K7EPK0 472 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 SSSCA1O60232 199 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 MED6O75586 246 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 MYCNOSP40205 109 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 RAB32Q13637 225 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 FCN2Q15485 313 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 LINC00482Q8N8I6 264 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 OR4F17Q8NGA8 305 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 OR11H7Q8NGC8 314 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 OR1N2Q8NGR9 330 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 EEF1AKMT3Q96AZ1 226 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 OR4F4Q96R69 305 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 HIPK2Q9H2X6 1198 aa9.54□□□□□ -0.88
HLA-DQB1-203ENST00000399082 PRSS46E5RG02 174 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 PPP5D1E7EU14 171 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 H3BP45 60 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 IFNA10P01566 189 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 HSPB1P04792 205 aaKnown RBP9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 SLURP1P55000 103 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 ZNF616Q08AN1 781 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 CLEC19AQ6UXS0 136 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 PINX1Q96BK5 328 aaKnown RBP9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 CXorf58Q96LI9 332 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 C21orf62Q9NYP8 219 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 THYN1Q9P016 225 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 PEF1Q9UBV8 284 aaKnown RBP9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 U3KQ87 197 aa9.53□□□□□ -0.88
HLA-DQB1-203ENST00000399082 TRBV7-1A0A0A6YYK4 115 aa9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 PMS2P5A8MQ11 134 aa9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 LINC01619G3V211 115 aa9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 H0YIZ8 118 aa9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CYB5BO43169 146 aa9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CCNKO75909 580 aa9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 HOXD3P31249 432 aaPredicted RBP9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 SUB1P53999 127 aaKnown RBP eCLIP9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 RNASEH2CQ8TDP1 164 aaKnown RBP9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 SMIM8Q96KF7 97 aa9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CIB3Q96Q77 187 aaPredicted RBP9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 NMES1Q9C002 83 aa9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 LSM5Q9Y4Y9 91 aaKnown RBP9.52□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CORTO00230 105 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 PF4P02776 101 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 CLEC3BP05452 202 aa9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 FCGR2BP31994 310 aaPredicted RBP9.51□□□□□ -0.89
HLA-DQB1-203ENST00000399082 GPR183P32249 361 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms