RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ZIC3O60481 467 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 HYPMO75409 117 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 OXTP01178 125 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 CSN3P07498 182 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 GP9P14770 177 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 RPL7L1Q6DKI1 246 aaKnown RBP5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 PLXDC1Q8IUK5 500 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 OR51G1Q8NGK1 321 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 Q96MF0 132 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 EMC6Q9BV81 110 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 HS3ST3B1Q9Y662 390 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 M0R1X1 148 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 HRASP01112 189 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 KRASP01116 189 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 FCGR2CP31995 323 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 EIF3IQ13347 325 aaKnown RBP5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 ABCA11PQ4W5N1 156 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 MRPL54Q6P161 138 aaKnown RBP5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 LRP11Q86VZ4 500 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 OR2M3Q8NG83 312 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 SH3BGRL3Q9H299 93 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 AK3Q9UIJ7 227 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 ANAPC10Q9UM13 185 aa5.48□□□□□ -1.53
TM9SF4-202ENST00000398022 ATRXP46100 2492 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 LOC101059948A0A1B0GTJ6 334 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 C17orf51A8MQB3 221 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 FAM157AC9JC47 383 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 FAM57BQ71RH2 274 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 MOB3BQ86TA1 216 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 TMEM230Q96A57 120 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 SDCBPO00560 298 aaPredicted RBP5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 DHRS3O75911 302 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 CXCL1P09341 107 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 KLRD1Q13241 179 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 PRR30Q53SZ7 412 aaPredicted RBP5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 GOLT1AQ6ZVE7 132 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 NIPSNAP3BQ9BS92 247 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 CDH20Q9HBT6 801 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 CLCF1Q9UBD9 225 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 CACNA1EQ15878 2313 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 UNC13CQ8NB66 2214 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 LRP4O75096 1905 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 FAM236DA0A1B0GTK5 79 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 FAM236CP0DP71 79 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 CD38P28907 300 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 CTRLP40313 264 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 LPAR6P43657 344 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 FABP6P51161 128 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 SSR4P51571 173 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 FOXF1Q12946 379 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 RSPO4Q2I0M5 234 aaPredicted RBP5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 SPATA45Q537H7 98 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 HAPLN4Q86UW8 402 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 LHFPL1Q86WI0 220 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 SPIN2AQ99865 258 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 SPIN2BQ9BPZ2 258 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 FBXL15Q9H469 300 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 TMEM106BQ9NUM4 274 aa5.47□□□□□ -1.53
TM9SF4-202ENST00000398022 VPS13CQ709C8 3753 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 H3BMH7 237 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 H3BS24 57 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 NPFFO15130 113 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 SPEM2Q0P670 501 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 MST1LQ2TV78 715 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 HRCT1Q6UXD1 115 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 OR5AS1Q8N127 324 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 ZNF441Q8N8Z8 693 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 NFAM1Q8NET5 270 aaPredicted RBP5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 RTBDNQ9BSG5 229 aaPredicted RBP5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 SFXN3Q9BWM7 321 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 EDA2RQ9HAV5 297 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 TPSG1Q9NRR2 321 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 NSG2Q9Y328 171 aa5.46□□□□□ -1.53
TM9SF4-202ENST00000398022 EPG5Q9HCE0 2579 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 UBR5O95071 2799 aaPredicted RBP5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 ACACAQ13085 2346 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 IGKV1D-43A0A0B4J1Z2 117 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 C17orf100A8MU93 164 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 YPEL1O60688 119 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 CA1P00915 261 aaPredicted RBP5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 IGLV3-19P01714 112 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 CNTFRP26992 372 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 KISS1Q15726 138 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 ADIRFQ15847 76 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 DEFB133Q30KQ1 61 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 YPEL2Q96QA6 119 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 TM2D2Q9BX73 214 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 LHFPL6Q9Y693 200 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 FKBP2P26885 142 aaKnown RBP5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 NDUFV3P56181 108 aaKnown RBP5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 SUPT4H1P63272 117 aaKnown RBP5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 LCN10Q6JVE6 187 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 OR1L3Q8NH93 324 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 RND1Q92730 232 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 HIST1H2AAQ96QV6 131 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 PRR13Q9NZ81 148 aa5.46□□□□□ -1.54
TM9SF4-202ENST00000398022 A0A0A6YYD4 124 aa5.45□□□□□ -1.54
TM9SF4-202ENST00000398022 TRAV8-6A0A0B4J262 113 aa5.45□□□□□ -1.54
TM9SF4-202ENST00000398022 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.45□□□□□ -1.54
TM9SF4-202ENST00000398022 RER1O15258 196 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms