RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 GPR82Q96P67 336 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 YTHDF2Q9Y5A9 579 aaKnown RBP4.77□□□□□ -1.65
PTPRD-206ENST00000397617 H7BYZ3 331 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 SIAH2O43255 324 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 RPL13AP40429 203 aaKnown RBP4.77□□□□□ -1.65
PTPRD-206ENST00000397617 EDDM3AQ14507 147 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 TIGITQ495A1 244 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 Q6AWC8 147 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 COX8CQ7Z4L0 72 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 OR10G9Q8NGN4 311 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 METTL1Q9UBP6 276 aaKnown RBP4.77□□□□□ -1.65
PTPRD-206ENST00000397617 A0A1B0GW15 77 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 LY6LH3BQJ8 138 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 IGHV2-5P01817 119 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 C8orf88P0DMB2 117 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 UBE2E1P51965 193 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 RPL15P61313 204 aaKnown RBP4.77□□□□□ -1.65
PTPRD-206ENST00000397617 FAM216BQ8N7L0 139 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 J3QLI3 93 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 ZNF841Q6ZN19 808 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 MRPL52Q86TS9 123 aaKnown RBP4.77□□□□□ -1.65
PTPRD-206ENST00000397617 LRP11Q86VZ4 500 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 RFESDQ8TAC1 157 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 AJUBAQ96IF1 538 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 FUT9Q9Y231 359 aa4.77□□□□□ -1.65
PTPRD-206ENST00000397617 DNASE2O00115 360 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-206ENST00000397617 RNASE2P10153 161 aaKnown RBP4.76□□□□□ -1.65
PTPRD-206ENST00000397617 TMEM241Q24JQ0 296 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 ZCCHC24Q8N2G6 241 aaKnown RBP4.76□□□□□ -1.65
PTPRD-206ENST00000397617 OR2T10Q8NGZ9 312 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 SLC25A33Q9BSK2 321 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 SRP14P37108 136 aaKnown RBP4.76□□□□□ -1.65
PTPRD-206ENST00000397617 C1orf194Q5T5A4 169 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 Q8N7P7 452 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 CCL13Q99616 98 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 PARP12Q9H0J9 701 aaKnown RBP4.76□□□□□ -1.65
PTPRD-206ENST00000397617 LENEPQ9Y5L5 61 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 ARHGAP32A7KAX9 2087 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 ATXN7O15265 892 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-206ENST00000397617 CCL20P78556 96 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 HAPLN4Q86UW8 402 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 CDC42EP3Q9UKI2 254 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 INSIG2Q9Y5U4 225 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 STAB1Q9NY15 2570 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 ORM1P02763 201 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 CRYGBP07316 175 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 SLC25A16P16260 332 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 NHLRC2Q8NBF2 726 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 VN1R17PQ8TDU5 208 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 SEPSECSQ9HD40 501 aaKnown RBP4.76□□□□□ -1.65
PTPRD-206ENST00000397617 ZNF134P52741 427 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 FAM90A2PQ658T7 463 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 OR4X1Q8NH49 305 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 RPEQ96AT9 228 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 NARFLQ9H6Q4 476 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 APCP25054 2843 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 HAGHQ16775 308 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 FRZBQ92765 325 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 SDF2L1Q9HCN8 221 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 ZNF581Q9P0T4 197 aa4.76□□□□□ -1.65
PTPRD-206ENST00000397617 NBEAQ8NFP9 2946 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 HLA-DRB1P01911 266 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 WDR73Q6P4I2 378 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 SMIM7Q9BQ49 75 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 OSTCQ9NRP0 149 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 TEX15Q9BXT5 2789 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 FREM2Q5SZK8 3169 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 COLCA2A8K830 154 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 NPIPB5A8MRT5 1133 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 ZNF727A8MUV8 499 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 OR2C1O95371 312 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 TMEM200BQ69YZ2 307 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 ABHD12Q8N2K0 398 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 SAMD10Q9BYL1 202 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 SRD5A3Q9H8P0 318 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 SIGLEC9Q9Y336 463 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 OR51B2Q9Y5P1 312 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 KCNAB3O43448 404 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 ICAM4Q14773 271 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 SLC16A13Q7RTY0 426 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 WFDC1Q9HC57 220 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 KLF12Q9Y4X4 402 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 F11RQ9Y624 299 aaKnown RBP4.75□□□□□ -1.65
PTPRD-206ENST00000397617 A0A1W2PPI3 338 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 TCRBV4S1A1TA0A5B7 111 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 C3orf80F5H4A9 247 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 RAMP3O60896 148 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 MOSP00540 346 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 PRR18Q8N4B5 295 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 OR2D3Q8NGH3 330 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 C1orf159Q96HA4 380 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 DNAJC4Q9NNZ3 241 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 IGHV2-26A0A0B4J1V2 119 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 ISLRO14498 428 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 SRSF6Q13247 344 aaKnown RBP4.75□□□□□ -1.65
PTPRD-206ENST00000397617 TOMM20LQ6UXN7 152 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 Q8N6K4 173 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 C5orf17Q8NAS9 161 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 BUB1B-PAK6H3BSN5 160 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 SAA1P0DJI8 122 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms