RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 BCL2P10415 239 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 RPS16P62249 146 aaKnown RBP11.92□□□□□ -0.5
CAPN3-207ENST00000397200 RAB11AP62491 216 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 HAGHQ16775 308 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 BSXQ3C1V8 233 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 BCL6BQ8N143 479 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-207ENST00000397200 SLC24A4Q8NFF2 622 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 MAP1LC3BQ9GZQ8 125 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 CDC42EP3Q9UKI2 254 aa11.92□□□□□ -0.5
CAPN3-207ENST00000397200 SONP18583 2426 aaKnown RBP11.91□□□□□ -0.5
CAPN3-207ENST00000397200 HIVEP2P31629 2446 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 F8P00451 2351 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 NPY1RP25929 384 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 BRS3P32247 399 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 ATP5IP56385 69 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-207ENST00000397200 SCGB2A2Q13296 93 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 RHEBQ15382 184 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 AWAT1Q58HT5 328 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 SOHLH1Q5JUK2 328 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 OR5B3Q8NH48 314 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 MEGF9Q9H1U4 602 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 FKBP11Q9NYL4 201 aa11.91□□□□□ -0.5
CAPN3-207ENST00000397200 LSM4Q9Y4Z0 139 aaKnown RBP11.91□□□□□ -0.5
CAPN3-207ENST00000397200 IGHV3-72A0A0B4J1Y9 119 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 SEC14L6B5MCN3 397 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 H7C2Y5 167 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 MC5RP33032 325 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 DEFB112Q30KQ8 113 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 FFAR4Q5NUL3 377 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 LCN15Q6UWW0 184 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 TREML4Q6UXN2 200 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 ZNF709Q8N972 641 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 CFHR4Q92496 578 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 HARBI1Q96MB7 349 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 P2RX4Q99571 388 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 NAV3Q8IVL0 2385 aa11.9□□□□□ -0.5
CAPN3-207ENST00000397200 MDFIC2A0A1B0GVS7 189 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 OR13C7P0DN81 318 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 OPRK1P41145 380 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 RAB13P51153 203 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 HABP2Q14520 560 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-207ENST00000397200 OR10G9Q8NGN4 311 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 OR10G7Q8NGN6 311 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 OR4C13Q8NGP0 309 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 TMEM167AQ8TBQ9 72 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 RXFP4Q8TDU9 374 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 TUBA4BQ9H853 241 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 PLEKHA3Q9HB20 300 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 ENY2Q9NPA8 101 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 SMCO4Q9NRQ5 59 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 GNG13Q9P2W3 67 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 WASHC3Q9Y3C0 194 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 TEX50A0A1B0GTY4 177 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 C7orf77A4D0Y5 90 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 INAFM1C9JVW0 142 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 MYOD1P15172 320 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 SRD5A1P18405 259 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 ATF4P18848 351 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-207ENST00000397200 CYB561D1Q8N8Q1 229 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 VSTM2AQ8TAG5 236 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 FLYWCH2Q96CP2 140 aaKnown RBP11.89□□□□□ -0.51
CAPN3-207ENST00000397200 MGST2Q99735 147 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 GGTLC1Q9BX51 225 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-207ENST00000397200 SLC39A9Q9NUM3 307 aa11.89□□□□□ -0.51
CAPN3-207ENST00000397200 MAST4O15021 2626 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 VENTXO95231 258 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 CA2P00918 260 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 IFNA1P01562 189 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 IGLV2-23P01705 113 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 SNRNP70P08621 437 aaKnown RBP11.88□□□□□ -0.51
CAPN3-207ENST00000397200 TAGLN2P37802 199 aaKnown RBP11.88□□□□□ -0.51
CAPN3-207ENST00000397200 FGF8P55075 233 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-207ENST00000397200 HES1Q14469 280 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-207ENST00000397200 C2orf83Q53S99 150 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 ARSJQ5FYB0 599 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-207ENST00000397200 FAM90A2PQ658T7 463 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 OR1L8Q8NGR8 309 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 SSX3Q99909 188 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 SLC25A22Q9H936 323 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 NPVFQ9HCQ7 196 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 NDUFA4L2Q9NRX3 87 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 KCNIP2Q9NS61 270 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 VAX2Q9UIW0 290 aa11.88□□□□□ -0.51
CAPN3-207ENST00000397200 FAM106CPP0CH98 169 aa11.87□□□□□ -0.51
CAPN3-207ENST00000397200 CD24P25063 80 aa11.87□□□□□ -0.51
CAPN3-207ENST00000397200 C15orf54Q8N8G6 183 aa11.87□□□□□ -0.51
CAPN3-207ENST00000397200 ZNF48Q96MX3 618 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-207ENST00000397200 ZFP92A6NM28 416 aa11.86□□□□□ -0.51
CAPN3-207ENST00000397200 COLCA2A8K830 154 aa11.86□□□□□ -0.51
CAPN3-207ENST00000397200 H3BUX3 64 aa11.86□□□□□ -0.51
CAPN3-207ENST00000397200 CYB5BO43169 146 aa11.86□□□□□ -0.51
CAPN3-207ENST00000397200 YIF1AO95070 293 aa11.86□□□□□ -0.51
CAPN3-207ENST00000397200 MOSP00540 346 aa11.86□□□□□ -0.51
CAPN3-207ENST00000397200 IFNA4P05014 189 aa11.86□□□□□ -0.51
CAPN3-207ENST00000397200 RPL8P62917 257 aaKnown RBP11.86□□□□□ -0.51
CAPN3-207ENST00000397200 OR2T10Q8NGZ9 312 aa11.86□□□□□ -0.51
CAPN3-207ENST00000397200 RAB24Q969Q5 203 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms