RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ID3Q02535 119 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 C9orf66Q5T8R8 295 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 MMD2Q8IY49 270 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 OR51H1Q8NH63 302 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 VSTM2AQ8TAG5 236 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 MS4A10Q96PG2 267 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 OR5B12Q96R08 314 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 AIFM2Q9BRQ8 373 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 ZNF355PQ9NSJ1 428 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 COA4Q9NYJ1 87 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 OR5AC2Q9NZP5 309 aa11.29□□□□□ -0.6
SEC13-208ENST00000397109 BRI3O95415 125 aa11.28□□□□□ -0.6
SEC13-208ENST00000397109 TRGV3P03979 118 aa11.28□□□□□ -0.6
SEC13-208ENST00000397109 LGALS1P09382 135 aaKnown RBP11.28□□□□□ -0.6
SEC13-208ENST00000397109 RPL12P30050 165 aaKnown RBP11.28□□□□□ -0.6
SEC13-208ENST00000397109 TNXAQ16473 311 aa11.28□□□□□ -0.6
SEC13-208ENST00000397109 OR2B11Q5JQS5 317 aa11.28□□□□□ -0.6
SEC13-208ENST00000397109 EIF5AL1Q6IS14 154 aaKnown RBP11.28□□□□□ -0.6
SEC13-208ENST00000397109 SPAG16Q8N0X2 631 aa11.28□□□□□ -0.6
SEC13-208ENST00000397109 OR5T1Q8NG75 326 aa11.28□□□□□ -0.6
SEC13-208ENST00000397109 RHOVQ96L33 236 aa11.28□□□□□ -0.6
SEC13-208ENST00000397109 ZNF471Q9BX82 626 aaPredicted RBP11.28□□□□□ -0.6
SEC13-208ENST00000397109 A0A0G2JLM5 398 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 RPS10-NUDT3A0A1W2PQS6 291 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 MSGN1A6NI15 193 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 FAM90A26D6RGX4 464 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 LINC01619G3V211 115 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 RAMP3O60896 148 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 PITX3O75364 302 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 JTBO76095 146 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 HRASP01112 189 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.6
SEC13-208ENST00000397109 MRGPRG-AS1Q2M3A8 158 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 ZNF585BQ52M93 769 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 SRSF12Q8WXF0 261 aaKnown RBP11.27□□□□□ -0.6
SEC13-208ENST00000397109 RRNAD1Q96FB5 475 aaKnown RBP11.27□□□□□ -0.6
SEC13-208ENST00000397109 ZNF430Q9H8G1 570 aaPredicted RBP11.27□□□□□ -0.6
SEC13-208ENST00000397109 CACFD1Q9UGQ2 172 aa11.27□□□□□ -0.6
SEC13-208ENST00000397109 SEC14L6B5MCN3 397 aa11.26□□□□□ -0.61
SEC13-208ENST00000397109 HPRT1P00492 218 aa11.26□□□□□ -0.61
SEC13-208ENST00000397109 HSPB1P04792 205 aaKnown RBP11.26□□□□□ -0.61
SEC13-208ENST00000397109 KRTAP10-11P60412 298 aa11.26□□□□□ -0.61
SEC13-208ENST00000397109 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
SEC13-208ENST00000397109 BAP18Q8IXM2 172 aa11.26□□□□□ -0.61
SEC13-208ENST00000397109 SLC25A31Q9H0C2 315 aa11.26□□□□□ -0.61
SEC13-208ENST00000397109 LSM5Q9Y4Y9 91 aaKnown RBP11.26□□□□□ -0.61
SEC13-208ENST00000397109 MAS1LP35410 378 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 INSL3P51460 131 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 PUSL1Q8N0Z8 303 aaKnown RBP11.25□□□□□ -0.61
SEC13-208ENST00000397109 TMEM167AQ8TBQ9 72 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 C11orf1Q9H5F2 150 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 CYTL1Q9NRR1 136 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 OVOL1O14753 267 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 KBTBD11O94819 623 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 LY86O95711 162 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 SCGB1D2O95969 90 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 IGHV3-11P01762 117 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 OR9G9P0C7N8 305 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 VKORC1L1Q8N0U8 176 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 DMBX1Q8NFW5 382 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 OR4A5Q8NH83 315 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 USMG5Q96IX5 58 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 RAB40CQ96S21 281 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 ZC4H2Q9NQZ6 224 aa11.25□□□□□ -0.61
SEC13-208ENST00000397109 IGHV4OR15-8A0A075B7B6 117 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 A0A087WW49 117 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 K7EIL1 84 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 S1PR2O95136 353 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 NQO2P16083 231 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 LPAR6P43657 344 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 TAS2R30P59541 319 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 BAXQ07812 192 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 ALKAL2Q6UX46 152 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 OR2C3Q8N628 320 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 UBAC2Q8NBM4 344 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 GPR146Q96CH1 333 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 BET1LQ9NYM9 111 aa11.24□□□□□ -0.61
SEC13-208ENST00000397109 SORL1Q92673 2214 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 WI2-2373I1.2A0A1W2PRP0 233 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 WRBO00258 174 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 MED6O75586 246 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 IGKV1-39P01597 117 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 IGKV1D-39P04432 117 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 IL6RP08887 468 aaPredicted RBP11.23□□□□□ -0.61
SEC13-208ENST00000397109 NMBP08949 121 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 FGF2P09038 288 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 ZP3P21754 424 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 RPL27AP46776 148 aaKnown RBP11.23□□□□□ -0.61
SEC13-208ENST00000397109 AKR1C2P52895 323 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 VAMP2P63027 116 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 TTC9CQ8N5M4 171 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 RNASE11Q8TAA1 199 aaKnown RBP11.23□□□□□ -0.61
SEC13-208ENST00000397109 RNF141Q8WVD5 230 aa11.23□□□□□ -0.61
SEC13-208ENST00000397109 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
SEC13-208ENST00000397109 LYRM2Q9NU23 88 aaPredicted RBP11.23□□□□□ -0.61
SEC13-208ENST00000397109 RCL1Q9Y2P8 373 aaKnown RBP11.23□□□□□ -0.61
SEC13-208ENST00000397109 BORCS7-ASMTA0A0B4J1R7 106 aa11.22□□□□□ -0.61
SEC13-208ENST00000397109 MARCH11A6NNE9 402 aa11.22□□□□□ -0.61
SEC13-208ENST00000397109 APELAP0DMC3 54 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms