RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PPP1R1CQ8WVI7 109 aa10.6□□□□□ -0.71
SEC13-205ENST00000397101 HSPB7Q9UBY9 170 aa10.6□□□□□ -0.71
SEC13-205ENST00000397101 ZNF256Q9Y2P7 627 aaPredicted RBP10.6□□□□□ -0.71
SEC13-205ENST00000397101 K7EPK0 472 aa10.59□□□□□ -0.71
SEC13-205ENST00000397101 SNCAP37840 140 aa10.59□□□□□ -0.71
SEC13-205ENST00000397101 CDX1P47902 265 aaPredicted RBP10.59□□□□□ -0.71
SEC13-205ENST00000397101 INSL3P51460 131 aa10.59□□□□□ -0.71
SEC13-205ENST00000397101 ID3Q02535 119 aa10.59□□□□□ -0.71
SEC13-205ENST00000397101 TMEM267Q0VDI3 215 aaPredicted RBP10.59□□□□□ -0.71
SEC13-205ENST00000397101 ECSCRQ19T08 205 aa10.59□□□□□ -0.71
SEC13-205ENST00000397101 UNQ5815/PRO19632Q6UWF5 114 aa10.59□□□□□ -0.71
SEC13-205ENST00000397101 STPG2Q8N412 459 aa10.59□□□□□ -0.71
SEC13-205ENST00000397101 OR10W1Q8NGF6 305 aa10.59□□□□□ -0.71
SEC13-205ENST00000397101 NOL4LQ96MY1 436 aaPredicted RBP10.59□□□□□ -0.71
SEC13-205ENST00000397101 CIB3Q96Q77 187 aaPredicted RBP10.59□□□□□ -0.71
SEC13-205ENST00000397101 NDUFA4L2Q9NRX3 87 aa10.59□□□□□ -0.71
SEC13-205ENST00000397101 LINC01548A6NM66 108 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 SEC14L6B5MCN3 397 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 SMLR1H3BR10 107 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 ATP6V0E1O15342 81 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 MPC2O95563 127 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 IFNA10P01566 189 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 REG1AP05451 166 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 OR13C7P0DN81 318 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 RPP30P78346 268 aaKnown RBP10.58□□□□□ -0.72
SEC13-205ENST00000397101 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 LFNGQ8NES3 379 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 CITED4Q96RK1 184 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 GON7Q9BXV9 100 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 ZC4H2Q9NQZ6 224 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 PSENENQ9NZ42 101 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 LINC00527Q9UJ94 153 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 WSB1Q9Y6I7 421 aa10.58□□□□□ -0.72
SEC13-205ENST00000397101 E7EUB6 86 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 AP4M1O00189 453 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 DEFA4P12838 97 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 NUP62P37198 522 aaPredicted RBP10.57□□□□□ -0.72
SEC13-205ENST00000397101 SUB1P53999 127 aaKnown RBP eCLIP10.57□□□□□ -0.72
SEC13-205ENST00000397101 NDPQ00604 133 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 IL15RAQ13261 267 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 FHL3Q13643 280 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 AARDQ4LEZ3 155 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 SPANXN5Q5MJ07 72 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 HSD17B13Q7Z5P4 300 aaPredicted RBP10.57□□□□□ -0.72
SEC13-205ENST00000397101 DCUN1D4Q92564 292 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 ST6GAL2Q96JF0 529 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 DUX3Q96PT4 197 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 RAB40CQ96S21 281 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 ZNF355PQ9NSJ1 428 aa10.57□□□□□ -0.72
SEC13-205ENST00000397101 FXYD6-FXYD2A0A087WZ82 144 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 TRAV41A0A0B4J266 112 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 TEX22C9J3V5 150 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 E5RGE8 158 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 H3BP45 60 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 DEDDO75618 318 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 LY86O95711 162 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 ELANEP08246 267 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 AREGP15514 252 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 CAV2P51636 162 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 SSBP2P81877 361 aaPredicted RBP10.56□□□□□ -0.72
SEC13-205ENST00000397101 FOXE3Q13461 319 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 PRSS54Q6PEW0 395 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 OR5T1Q8NG75 326 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 TMEM68Q96MH6 324 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 SRSF8Q9BRL6 282 aaKnown RBP10.56□□□□□ -0.72
SEC13-205ENST00000397101 ZMAT4Q9H898 229 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 OR5AC2Q9NZP5 309 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 MBD2Q9UBB5 411 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 STRAPQ9Y3F4 350 aaKnown RBP10.56□□□□□ -0.72
SEC13-205ENST00000397101 FBXO7Q9Y3I1 522 aa10.56□□□□□ -0.72
SEC13-205ENST00000397101 CGB1A6NKQ9 187 aa10.55□□□□□ -0.72
SEC13-205ENST00000397101 G3V318 75 aa10.55□□□□□ -0.72
SEC13-205ENST00000397101 CYB5BO43169 146 aa10.55□□□□□ -0.72
SEC13-205ENST00000397101 OR8U8P0C7N1 319 aa10.55□□□□□ -0.72
SEC13-205ENST00000397101 HTR2BP41595 481 aa10.55□□□□□ -0.72
SEC13-205ENST00000397101 RAB11AP62491 216 aa10.55□□□□□ -0.72
SEC13-205ENST00000397101 SLC25A24Q6NUK1 477 aa10.55□□□□□ -0.72
SEC13-205ENST00000397101 NOXA1Q86UR1 476 aa10.55□□□□□ -0.72
SEC13-205ENST00000397101 SMIM8Q96KF7 97 aa10.55□□□□□ -0.72
SEC13-205ENST00000397101 GAR1Q9NY12 217 aaKnown RBP10.55□□□□□ -0.72
SEC13-205ENST00000397101 TRAV14DV4A0A0A6YYC5 116 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 A0A1B0GW64 132 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 IGLC7A0M8Q6 106 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 IFNA4P05014 189 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 RPLP1P05386 114 aaKnown RBP10.54□□□□□ -0.72
SEC13-205ENST00000397101 EGR2P11161 476 aaPredicted RBP10.54□□□□□ -0.72
SEC13-205ENST00000397101 NPY1RP25929 384 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 WT1-ASQ06250 92 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 AKIRIN2Q53H80 203 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 Q5BKY6 102 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 TCTE3Q8IZS6 198 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 OR2C3Q8N628 320 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 SLC24A4Q8NFF2 622 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 C4orf3Q8WVX3 66 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 U3KQ87 197 aa10.54□□□□□ -0.72
SEC13-205ENST00000397101 FAM24AA6NFZ4 105 aa10.53□□□□□ -0.72
SEC13-205ENST00000397101 H0YIZ8 118 aa10.53□□□□□ -0.72
SEC13-205ENST00000397101 IGF1P05019 195 aa10.53□□□□□ -0.72
SEC13-205ENST00000397101 P2RY1P47900 373 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms