RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 RAB14P61106 215 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 C19orf54Q5BKX5 351 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 TMEM219Q86XT9 240 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 CACNG8Q8WXS5 425 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 MGST2Q99735 147 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 MOB4Q9Y3A3 225 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 IGKV1OR2-108A0A075B7D4 117 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 NPIPB5A8MRT5 1133 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 H3BUX3 64 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 FGF7P21781 194 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 SCGB1C1Q8TD33 95 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 ZNF48Q96MX3 618 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-204ENST00000396548 NPVFQ9HCQ7 196 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 CUBNO60494 3623 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 APELAP0DMC3 54 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 IER3P46695 156 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 FHITP49789 147 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 RAB5CP51148 216 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 SUB1P53999 127 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRIM39-204ENST00000396548 BTNL8Q6UX41 500 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 TMEM182Q6ZP80 229 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-204ENST00000396548 MRPL41Q8IXM3 137 aaKnown RBP10.03□□□□□ -0.8
TRIM39-204ENST00000396548 RASL11BQ9BPW5 248 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 FAM103A1Q9BTL3 118 aaKnown RBP10.03□□□□□ -0.8
TRIM39-204ENST00000396548 PARP11Q9NR21 331 aa10.03□□□□□ -0.8
TRIM39-204ENST00000396548 TRIM77I1YAP6 450 aa10.02□□□□□ -0.8
TRIM39-204ENST00000396548 MPDU1O75352 247 aa10.02□□□□□ -0.8
TRIM39-204ENST00000396548 CNIH1O95406 144 aa10.02□□□□□ -0.8
TRIM39-204ENST00000396548 CRIP2P52943 208 aaPredicted RBP10.02□□□□□ -0.8
TRIM39-204ENST00000396548 SERF2P84101 59 aa10.02□□□□□ -0.8
TRIM39-204ENST00000396548 VSIRQ9H7M9 311 aa10.02□□□□□ -0.8
TRIM39-204ENST00000396548 MRPL36Q9P0J6 103 aaKnown RBP10.02□□□□□ -0.8
TRIM39-204ENST00000396548 LINC01548A6NM66 108 aa10.02□□□□□ -0.81
TRIM39-204ENST00000396548 UMAD1C9J7I0 102 aa10.02□□□□□ -0.81
TRIM39-204ENST00000396548 SMAD7O15105 426 aaKnown RBP10.02□□□□□ -0.81
TRIM39-204ENST00000396548 CD5LO43866 347 aa10.02□□□□□ -0.81
TRIM39-204ENST00000396548 Q6YL49 198 aa10.02□□□□□ -0.81
TRIM39-204ENST00000396548 ZNF705EA8MWA4 302 aaPredicted RBP10.02□□□□□ -0.81
TRIM39-204ENST00000396548 I3L2K1 104 aa10.02□□□□□ -0.81
TRIM39-204ENST00000396548 ACSM6Q6P461 480 aa10.02□□□□□ -0.81
TRIM39-204ENST00000396548 TMEM144Q7Z5S9 345 aa10.02□□□□□ -0.81
TRIM39-204ENST00000396548 SGMS2Q8NHU3 365 aa10.02□□□□□ -0.81
TRIM39-204ENST00000396548 DPPA3Q6W0C5 159 aa10.01□□□□□ -0.81
TRIM39-204ENST00000396548 SLC16A13Q7RTY0 426 aa10.01□□□□□ -0.81
TRIM39-204ENST00000396548 OR2T6Q8NHC8 308 aa10.01□□□□□ -0.81
TRIM39-204ENST00000396548 GGTLC1Q9BX51 225 aa10.01□□□□□ -0.81
TRIM39-204ENST00000396548 WNT10AQ9GZT5 417 aa10.01□□□□□ -0.81
TRIM39-204ENST00000396548 FLNAP21333 2647 aaKnown RBP10.01□□□□□ -0.81
TRIM39-204ENST00000396548 FASNP49327 2511 aaKnown RBP10.01□□□□□ -0.81
TRIM39-204ENST00000396548 PXDC1Q5TGL8 231 aa10.01□□□□□ -0.81
TRIM39-204ENST00000396548 C16orf82Q7Z2V1 217 aa10.01□□□□□ -0.81
TRIM39-204ENST00000396548 FANCD2OSQ96PS1 177 aa10.01□□□□□ -0.81
TRIM39-204ENST00000396548 IGLV11-55A0A075B6I3 123 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 IGKV1D-37A0A075B6S9 117 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 MFSD2BA6NFX1 497 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 OPRK1P41145 380 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 ZNF726P1Q15940 193 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 THAP8Q8NA92 274 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 SH2D7A6NKC9 451 aaPredicted RBP10□□□□□ -0.81
TRIM39-204ENST00000396548 IGHV4-59P01825 116 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 SLC25A24Q6NUK1 477 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 TEPPQ6URK8 271 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 CORTO00230 105 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 ATP6V0E1O15342 81 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 YIF1AO95070 293 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 PRR20EP86478 221 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 PRR20CP86479 221 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 PRR20DP86480 221 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 PRR20BP86481 221 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 PRR20AP86496 221 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 Q6ZRG5 221 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 SSX7Q7RTT5 188 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 EIF4E3Q8N5X7 224 aaKnown RBP10□□□□□ -0.81
TRIM39-204ENST00000396548 TMEM116Q8NCL8 245 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 RPRMQ9NS64 109 aa10□□□□□ -0.81
TRIM39-204ENST00000396548 K7EIM0 57 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 AGPAT2O15120 278 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 LINC00869P0C866 280 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 BLOC1S1P78537 153 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 LY6EQ16553 131 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 COMMD7Q86VX2 200 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 LFNGQ8NES3 379 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 SUN5Q8TC36 379 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 SLC45A2Q9UMX9 530 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 TMEM41BQ5BJD5 291 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 SPSB3Q6PJ21 355 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 C22orf15Q8WYQ4 148 aa9.99□□□□□ -0.81
TRIM39-204ENST00000396548 SMCO3A2RU48 225 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 IGF1P05019 195 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 RPL29P47914 159 aaKnown RBP9.98□□□□□ -0.81
TRIM39-204ENST00000396548 AKIRIN2Q53H80 203 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 RPP25LQ8N5L8 163 aaKnown RBP9.98□□□□□ -0.81
TRIM39-204ENST00000396548 OR1L6Q8NGR2 347 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 FAM110DQ8TAY7 271 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-204ENST00000396548 SCRT1Q9BWW7 348 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 PITPNC1Q9UKF7 332 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 ABCA1O95477 2261 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 C17orf112F2Z3M2 114 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 M0QZK8 103 aa9.98□□□□□ -0.81
TRIM39-204ENST00000396548 IGHG2P01859 326 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms