RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 CX3CL1P78423 397 aa7.49□□□□□ -1.21
RAE1-202ENST00000395840 TFF3Q07654 80 aa7.49□□□□□ -1.21
RAE1-202ENST00000395840 C5orf64Q2M2E5 130 aa7.49□□□□□ -1.21
RAE1-202ENST00000395840 MRPL54Q6P161 138 aaKnown RBP7.49□□□□□ -1.21
RAE1-202ENST00000395840 MRPL21Q7Z2W9 205 aaKnown RBP7.49□□□□□ -1.21
RAE1-202ENST00000395840 TUSC5Q8IXB3 177 aa7.49□□□□□ -1.21
RAE1-202ENST00000395840 PP6455Q8WZ26 134 aa7.49□□□□□ -1.21
RAE1-202ENST00000395840 TMEM70Q9BUB7 260 aa7.49□□□□□ -1.21
RAE1-202ENST00000395840 SSBP4Q9BWG4 385 aaPredicted RBP7.49□□□□□ -1.21
RAE1-202ENST00000395840 ZNF442Q9H7R0 627 aa7.49□□□□□ -1.21
RAE1-202ENST00000395840 V9GYV3 84 aa7.49□□□□□ -1.21
RAE1-202ENST00000395840 IGHV3-15A0A0B4J1V0 119 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 PGLYRP1O75594 196 aaPredicted RBP7.48□□□□□ -1.21
RAE1-202ENST00000395840 DHRS3O75911 302 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 TCL1AP56279 114 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 CEACAM21Q3KPI0 293 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 PRAMEF5Q5TYX0 476 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 PRAMEF6Q5VXH4 476 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 OR5A2Q8NGI9 324 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 OR1L1Q8NH94 360 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 GEMIN7Q9H840 131 aaKnown RBP7.48□□□□□ -1.21
RAE1-202ENST00000395840 SPENQ96T58 3664 aaKnown RBP7.48□□□□□ -1.21
RAE1-202ENST00000395840 TRAV38-1A0A0B4J264 116 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 F2RL2O00254 374 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 SLC25A6P12236 298 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 USF1P22415 310 aaPredicted RBP7.48□□□□□ -1.21
RAE1-202ENST00000395840 F2RP25116 425 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 SRSF1Q07955 248 aaKnown RBP eCLIP7.48□□□□□ -1.21
RAE1-202ENST00000395840 FOXF2Q12947 444 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 FOXE3Q13461 319 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 CD300EQ496F6 205 aaPredicted RBP7.48□□□□□ -1.21
RAE1-202ENST00000395840 AAED1Q7RTV5 226 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 STPG3Q8N7X2 389 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 OR2T6Q8NHC8 308 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 EAF1Q96JC9 268 aaPredicted RBP7.48□□□□□ -1.21
RAE1-202ENST00000395840 LINC00470Q9BZP3 86 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 PNRC2Q9NPJ4 139 aaKnown RBP7.48□□□□□ -1.21
RAE1-202ENST00000395840 SCRT2Q9NQ03 307 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 FAM90A27PA6NNH2 459 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 APOA2P02652 100 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 APCSP02743 223 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 SCTP09683 121 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 HTR1DP28221 377 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 RAB31Q13636 194 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 OR8B8Q15620 311 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 GCSAMLQ5JQS6 135 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 RNASEKQ6P5S7 137 aaKnown RBP7.48□□□□□ -1.21
RAE1-202ENST00000395840 Q6ZT83 130 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 OR10AG1Q8NH19 301 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 BLNKQ8WV28 456 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 NPCDR1Q9BY65 106 aa7.48□□□□□ -1.21
RAE1-202ENST00000395840 F5H5K5 113 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 CLDN1O95832 211 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 HLA-DQA1P01909 254 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 HLA-DRB1P01911 266 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 AMY1AP04745 511 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 FABP6P51161 128 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 RPS16P62249 146 aaKnown RBP7.47□□□□□ -1.21
RAE1-202ENST00000395840 SEC11AP67812 179 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 MALLQ13021 153 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 TCTEX1D4Q5JR98 221 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 DOCK7Q96N67 2140 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 IGKV1-27A0A075B6S5 117 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 A0A0G2JLM5 398 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 PSMB11A5LHX3 300 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 SNAI2O43623 268 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 ZNF207O43670 478 aaKnown RBP7.47□□□□□ -1.21
RAE1-202ENST00000395840 PDCD6O75340 191 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 RHBDL1O75783 438 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 GPM6AP51674 278 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 TMEM177Q53S58 311 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 OSR2Q8N2R0 312 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 C1orf162Q8NEQ5 155 aaPredicted RBP7.47□□□□□ -1.21
RAE1-202ENST00000395840 MRAP2Q96G30 205 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 PSMG3-AS1Q96PY0 264 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 PGPEP1Q9NXJ5 209 aa7.47□□□□□ -1.21
RAE1-202ENST00000395840 TECRQ9NZ01 308 aaKnown RBP7.47□□□□□ -1.21
RAE1-202ENST00000395840 C16orf97H3BN30 126 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 H3BRM9 83 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 IGKV1-39P01597 117 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 IGKV1D-39P04432 117 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 MGST1P10620 155 aaKnown RBP7.46□□□□□ -1.22
RAE1-202ENST00000395840 RPL31P62899 125 aaKnown RBP7.46□□□□□ -1.22
RAE1-202ENST00000395840 FXYD3Q14802 87 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 COX19Q49B96 90 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 TMEM97Q5BJF2 176 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 TMEM14EPQ6UXP3 125 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 TMEM147Q9BVK8 224 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 C12orf49Q9H741 205 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 SPCS1Q9Y6A9 102 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 GCN1Q92616 2671 aaKnown RBP7.46□□□□□ -1.22
RAE1-202ENST00000395840 IGKV1-12A0A0C4DH73 117 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 OR7C1O76099 320 aaPredicted RBP7.46□□□□□ -1.22
RAE1-202ENST00000395840 IGKV1D-12P01611 117 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 IGLV3-1P01715 115 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 ADH4P08319 380 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 HIST1H1EP10412 219 aaKnown RBP7.46□□□□□ -1.22
RAE1-202ENST00000395840 PRSS12P56730 875 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 CLRN1P58418 232 aa7.46□□□□□ -1.22
RAE1-202ENST00000395840 C9orf135Q5VTT2 229 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms