RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 TET2Q6N021 2002 aaPredicted RBP8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 M0R1B8 84 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 COX7A2P2O60397 106 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 RNASE2P10153 161 aaKnown RBP8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 HIST1H1EP10412 219 aaKnown RBP8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 SRIP30626 198 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 CDKN1AP38936 164 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 CCL11P51671 97 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 PRRX1P54821 245 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 TNFAIP6P98066 277 aaPredicted RBP8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 SPATA45Q537H7 98 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 ATP1A1-AS1Q5TC04 95 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 GRAMD2BQ96HH9 432 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 FAM103A1Q9BTL3 118 aaKnown RBP8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 SAP30LQ9HAJ7 183 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 LINC00312Q9Y6C7 94 aa8.21□□□□□ -1.1
UBE2D3-208ENST00000394803 A0A1W2PS18 150 aa8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 GGTLC3B5MD39 225 aa8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 CDX4O14627 284 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 SPRY3O43610 288 aa8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 ZNF83P51522 516 aa8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 HOXA4Q00056 320 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 ETFRF1Q6IPR1 90 aa8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 ZNF833PQ6ZTB9 187 aa8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 TMEM208Q9BTX3 173 aa8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 RNASE7Q9H1E1 156 aaKnown RBP8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 ZNF430Q9H8G1 570 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 FBXL7Q9UJT9 491 aa8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 SOX21Q9Y651 276 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 CACNA1DQ01668 2161 aa8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 MED13Q9UHV7 2174 aa8.2□□□□□ -1.1
UBE2D3-208ENST00000394803 IGHV3-7P01780 117 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 CT45A6P0DMU7 189 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 CT45A5P0DMU8 189 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 CT45A7P0DMV0 189 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 PMCHP20382 165 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 GNG10P50151 68 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 RPL8P62917 257 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 C10orf113Q5VZT2 155 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 ZNF788Q6ZQV5 615 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 RBM14Q96PK6 669 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 GAFA1Q96PS6 74 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 AMMECR1Q9Y4X0 333 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 DPRXA6NFQ7 191 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 BMPR1BO00238 502 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 IGLV2-8P01709 118 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 SAA1P0DJI8 122 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 CTRLP40313 264 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 COMPP49747 757 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 HNRNPA3P51991 378 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 FXYD3Q14802 87 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 TMEM177Q53S58 311 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 TEX36Q5VZQ5 186 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 PDPNQ86YL7 162 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 FDCSPQ8NFU4 85 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 C22orf15Q8WYQ4 148 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 LEAP2Q969E1 77 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 ZNF503Q96F45 646 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 HARBI1Q96MB7 349 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 TXN2Q99757 166 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 PAXXQ9BUH6 204 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 LPAR2Q9HBW0 351 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 NDUFA4L2Q9NRX3 87 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 CBY1Q9Y3M2 126 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 TANC2Q9HCD6 1990 aa8.19□□□□□ -1.1
UBE2D3-208ENST00000394803 HSBP1O75506 76 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 TNFRSF1AP19438 455 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 CA7P43166 264 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 UBE2G1P62253 170 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 KLF5Q13887 457 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 TBR1Q16650 682 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 MRPL54Q6P161 138 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 C8orf31Q8N9H6 132 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 TMEM167AQ8TBQ9 72 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 ZFP30Q9Y2G7 519 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 CACNA1GO43497 2377 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 TCRBV4S1A1TA0A5B7 111 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 PEX7O00628 323 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 OR2J3O76001 311 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 DMRTA1Q5VZB9 504 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 C1orf229Q6ZS94 237 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 RBMXL3Q8N7X1 1067 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 OR4C13Q8NGP0 309 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 FLYWCH2Q96CP2 140 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 SLC25A2Q9BXI2 301 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 SSUH2Q9Y2M2 353 aa8.18□□□□□ -1.1
UBE2D3-208ENST00000394803 IGKV1OR2-108A0A075B7D4 117 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 PSMB11A5LHX3 300 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 TCL1AP56279 114 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 ZADH2Q8N4Q0 377 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 THAP8Q8NA92 274 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 TSKUQ8WUA8 353 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 TMEM186Q96B77 213 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 PERPQ96FX8 193 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 FAM167A-AS1Q96KT0 104 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 AHCTF1Q8WYP5 2266 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 F2Z2F3 143 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 SPINK4O60575 86 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 C3orf79P0CE67 100 aa8.17□□□□□ -1.1
UBE2D3-208ENST00000394803 IGLC2P0DOY2 106 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms