RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 ZFP92A6NM28 416 aa15.18■□□□□ 0.02
CLDND1-203ENST00000394181 MBP02144 154 aa15.18■□□□□ 0.02
CLDND1-203ENST00000394181 GATA2P23769 480 aaPredicted RBP15.18■□□□□ 0.02
CLDND1-203ENST00000394181 ATP5IP56385 69 aaPredicted RBP15.18■□□□□ 0.02
CLDND1-203ENST00000394181 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.18■□□□□ 0.02
CLDND1-203ENST00000394181 NPBQ8NG41 125 aa15.18■□□□□ 0.02
CLDND1-203ENST00000394181 SRSF12Q8WXF0 261 aaKnown RBP15.18■□□□□ 0.02
CLDND1-203ENST00000394181 MAS1LP35410 378 aa15.17■□□□□ 0.02
CLDND1-203ENST00000394181 STPG3Q8N7X2 389 aa15.17■□□□□ 0.02
CLDND1-203ENST00000394181 ACY3Q96HD9 319 aa15.17■□□□□ 0.02
CLDND1-203ENST00000394181 DMRT1Q9Y5R6 373 aa15.17■□□□□ 0.02
CLDND1-203ENST00000394181 ACOT6Q3I5F7 207 aaPredicted RBP15.17■□□□□ 0.02
CLDND1-203ENST00000394181 CCDC144NLQ6NUI1 221 aa15.17■□□□□ 0.02
CLDND1-203ENST00000394181 SLC16A13Q7RTY0 426 aa15.17■□□□□ 0.02
CLDND1-203ENST00000394181 TMEM144Q7Z5S9 345 aa15.17■□□□□ 0.02
CLDND1-203ENST00000394181 OR2T10Q8NGZ9 312 aa15.17■□□□□ 0.02
CLDND1-203ENST00000394181 GATAD1Q8WUU5 269 aa15.17■□□□□ 0.02
CLDND1-203ENST00000394181 FAM103A1Q9BTL3 118 aaKnown RBP15.17■□□□□ 0.02
CLDND1-203ENST00000394181 ACTR3CQ9C0K3 210 aaPredicted RBP15.17■□□□□ 0.02
CLDND1-203ENST00000394181 ANKRD17O75179 2603 aaKnown RBP15.16■□□□□ 0.02
CLDND1-203ENST00000394181 CTXND1A0A1B0GTU2 59 aa15.16■□□□□ 0.02
CLDND1-203ENST00000394181 NDUFA3O95167 84 aa15.16■□□□□ 0.02
CLDND1-203ENST00000394181 LINC00869P0C866 280 aa15.16■□□□□ 0.02
CLDND1-203ENST00000394181 B2MP61769 119 aa15.16■□□□□ 0.02
CLDND1-203ENST00000394181 Q8N6K4 173 aa15.16■□□□□ 0.02
CLDND1-203ENST00000394181 MALSU1Q96EH3 234 aa15.16■□□□□ 0.02
CLDND1-203ENST00000394181 SLC35B3Q9H1N7 401 aa15.16■□□□□ 0.02
CLDND1-203ENST00000394181 IGHV3-21A0A0B4J1V1 117 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 FNDC10F2Z333 226 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 NPFFO15130 113 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 NUPL2O15504 423 aaKnown RBP15.15■□□□□ 0.02
CLDND1-203ENST00000394181 CNIH1O95406 144 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 NPBWR1P48145 328 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 ZNF506Q5JVG8 444 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 SLC45A2Q9UMX9 530 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 TBL2Q9Y4P3 447 aaKnown RBP15.15■□□□□ 0.02
CLDND1-203ENST00000394181 LOC102723971A0A1B0GUV8 181 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 NCBP2LA6PVI3 153 aaKnown RBP15.15■□□□□ 0.02
CLDND1-203ENST00000394181 OOSP1A8MZH6 123 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 PAX1P15863 534 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 OR10J1P30954 320 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 CLEC12BQ2HXU8 276 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 C5orf64Q2M2E5 130 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 SVBPQ8N300 66 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 MISP3Q96FF7 219 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 ZANQ9Y493 2812 aa15.15■□□□□ 0.02
CLDND1-203ENST00000394181 CYB5BO43169 146 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 SRP19P09132 144 aaKnown RBP15.14■□□□□ 0.01
CLDND1-203ENST00000394181 GPX4P36969 197 aaPredicted RBP15.14■□□□□ 0.01
CLDND1-203ENST00000394181 CDC34P49427 236 aaPredicted RBP15.14■□□□□ 0.01
CLDND1-203ENST00000394181 CEBPGP53567 150 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 SUB1P53999 127 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLDND1-203ENST00000394181 PRR20EP86478 221 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 PRR20CP86479 221 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 PRR20DP86480 221 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 PRR20BP86481 221 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 PRR20AP86496 221 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 SPATA31B1PQ5VZV4 182 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 RNASEH2CQ8TDP1 164 aaKnown RBP15.14■□□□□ 0.01
CLDND1-203ENST00000394181 NPIPB3Q92617 1050 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 NKX6-2Q9C056 277 aaPredicted RBP15.14■□□□□ 0.01
CLDND1-203ENST00000394181 SOX21Q9Y651 276 aaPredicted RBP15.14■□□□□ 0.01
CLDND1-203ENST00000394181 APCP25054 2843 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 SEC14L6B5MCN3 397 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 RPL29P47914 159 aaKnown RBP15.14■□□□□ 0.01
CLDND1-203ENST00000394181 EBI3Q14213 229 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 BRD3OSQ6XYD6 125 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 CACNG8Q8WXS5 425 aa15.14■□□□□ 0.01
CLDND1-203ENST00000394181 SEPSECSQ9HD40 501 aaKnown RBP15.14■□□□□ 0.01
CLDND1-203ENST00000394181 TMEM11P17152 192 aa15.13■□□□□ 0.01
CLDND1-203ENST00000394181 FXYD3Q14802 87 aa15.13■□□□□ 0.01
CLDND1-203ENST00000394181 PVRIGQ6DKI7 326 aa15.13■□□□□ 0.01
CLDND1-203ENST00000394181 HIST2H2BCQ6DN03 193 aa15.13■□□□□ 0.01
CLDND1-203ENST00000394181 ABHD5Q8WTS1 349 aa15.13■□□□□ 0.01
CLDND1-203ENST00000394181 SLC25A33Q9BSK2 321 aa15.13■□□□□ 0.01
CLDND1-203ENST00000394181 FAM74A7A6NL05 159 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 BCL2P10415 239 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 RAB31Q13636 194 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 FAM74A3Q4VXF1 159 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 IQCF2Q8IXL9 164 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 CYB561D1Q8N8Q1 229 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 ZNF114Q8NC26 417 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 MAPK1IP1LQ8NDC0 245 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 SLC35E1Q96K37 410 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 ABCA1O95477 2261 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 NDPQ00604 133 aa15.12■□□□□ 0.01
CLDND1-203ENST00000394181 TMA7Q9Y2S6 64 aaKnown RBP15.12■□□□□ 0.01
CLDND1-203ENST00000394181 IGKV1D-37A0A075B6S9 117 aa15.11■□□□□ 0.01
CLDND1-203ENST00000394181 MSMBP08118 114 aa15.11■□□□□ 0.01
CLDND1-203ENST00000394181 IGHV4-38-2P0DP08 117 aa15.11■□□□□ 0.01
CLDND1-203ENST00000394181 ZNF90Q03938 601 aa15.11■□□□□ 0.01
CLDND1-203ENST00000394181 KHDC3LQ587J8 217 aa15.11■□□□□ 0.01
CLDND1-203ENST00000394181 OR1P1Q8NH06 330 aa15.11■□□□□ 0.01
CLDND1-203ENST00000394181 F11RQ9Y624 299 aaKnown RBP15.11■□□□□ 0.01
CLDND1-203ENST00000394181 TRAV40A0A0B4J280 105 aa15.11■□□□□ 0.01
CLDND1-203ENST00000394181 A0A1W2PPV4 95 aa15.11■□□□□ 0.01
CLDND1-203ENST00000394181 RND2P52198 227 aa15.11■□□□□ 0.01
CLDND1-203ENST00000394181 CX3CL1P78423 397 aa15.11■□□□□ 0.01
CLDND1-203ENST00000394181 DNASE2O00115 360 aaPredicted RBP15.1■□□□□ 0.01
CLDND1-203ENST00000394181 HSPB1P04792 205 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms