RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 PRNTQ86SH4 94 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 MYOZ3Q8TDC0 251 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 NEUROG1Q92886 237 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 MAP1LC3AQ9H492 121 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 EPDR1Q9UM22 224 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 V9GYV3 84 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 DOCK9Q9BZ29 2069 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 PRR33A8MZF0 331 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 CDKN1AP38936 164 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 RPL39P5Q59GN2 51 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 C20orf204Q6ZNR8 217 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 LINC00305Q7Z4B0 112 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 CIARTQ8N365 385 aaPredicted RBP7.15□□□□□ -1.27
GABRA1-202ENST00000393943 TMEM116Q8NCL8 245 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 ST6GALNAC3Q8NDV1 305 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 ZNF414Q96IQ9 312 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 OTORQ9NRC9 128 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 DEPPQ9NTK1 212 aa7.15□□□□□ -1.27
GABRA1-202ENST00000393943 C7orf71A4D174 169 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 CCL11P51671 97 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 MEF2CQ06413 473 aaPredicted RBP7.14□□□□□ -1.27
GABRA1-202ENST00000393943 SPOCK3Q9BQ16 436 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 FZR1Q9UM11 496 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 SMIM27A0A1W2PRY6 76 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 TCRBV4S1A1TA0A5B7 111 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 NCBP2LA6PVI3 153 aaKnown RBP7.14□□□□□ -1.27
GABRA1-202ENST00000393943 NTF4P34130 210 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 NMUP48645 174 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 PSG9Q00887 426 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 RBPJQ06330 500 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 C3AR1Q16581 482 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 WDR82Q6UXN9 313 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 UNQ6494/PRO21346Q6UXR6 183 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 SLC25A48Q6ZT89 311 aaKnown RBP7.14□□□□□ -1.27
GABRA1-202ENST00000393943 VKORC1L1Q8N0U8 176 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 RPEQ96AT9 228 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 AHRRA9YTQ3 701 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 SYS1-DBNDD2H3BUS1 97 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 KLF7O75840 302 aaPredicted RBP7.14□□□□□ -1.27
GABRA1-202ENST00000393943 SPINK2P20155 84 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 CEACAM3P40198 252 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 TWIST1Q15672 202 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 MOB3BQ86TA1 216 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 C18orf32Q8TCD1 76 aa7.14□□□□□ -1.27
GABRA1-202ENST00000393943 SEPSECSQ9HD40 501 aaKnown RBP7.14□□□□□ -1.27
GABRA1-202ENST00000393943 IGHV2OR16-5A0A0B4J2B6 119 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 IL18BPO95998 194 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 IGHV3-13P01766 116 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 IGHV3-7P01780 117 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 KIR2DL2P43627 348 aaPredicted RBP7.13□□□□□ -1.27
GABRA1-202ENST00000393943 REG1BP48304 166 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 HERVK_113P61574 105 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 NPIPB3Q92617 1050 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 NUDT11Q96G61 164 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 RAB1BQ9H0U4 201 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 PILRBQ9UKJ0 227 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 NUP210LQ5VU65 1888 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 CKS2P33552 79 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 CLEC7AQ9BXN2 247 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 SPCS1Q9Y6A9 102 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 EPOPA6NHQ4 379 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 WNT9BO14905 357 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 APOHP02749 345 aaPredicted RBP7.13□□□□□ -1.27
GABRA1-202ENST00000393943 ERVK11-1P61568 191 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 OR2K2Q8NGT1 345 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 SRSF12Q8WXF0 261 aaKnown RBP7.13□□□□□ -1.27
GABRA1-202ENST00000393943 TIMD4Q96H15 378 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 ZNF492Q9P255 531 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 A0A0G2JMM0 328 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 A0A1W2PPB8 328 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 KIR3DP1A8MWS1 328 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 SS18L1O75177 396 aaPredicted RBP7.13□□□□□ -1.27
GABRA1-202ENST00000393943 CLEC3BP05452 202 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 UQCRFS1P47985 274 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 FOXA3P55318 350 aaPredicted RBP7.13□□□□□ -1.27
GABRA1-202ENST00000393943 OR5AN1Q8NGI8 311 aa7.13□□□□□ -1.27
GABRA1-202ENST00000393943 KLF5Q13887 457 aaPredicted RBP7.12□□□□□ -1.27
GABRA1-202ENST00000393943 ALKBH6Q3KRA9 238 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 TIMM23BQ5SRD1 257 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 LOXL4Q96JB6 756 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 VDAC2P45880 294 aaPredicted RBP7.12□□□□□ -1.27
GABRA1-202ENST00000393943 ORMDL3Q8N138 153 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 ZNF784Q8NCA9 323 aaPredicted RBP7.12□□□□□ -1.27
GABRA1-202ENST00000393943 NUP35Q8NFH5 326 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 IGHV3OR15-7A0A075B7D8 119 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 F2RL2O00254 374 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 GNG7O60262 68 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 ATP5LO75964 103 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 AGFG2O95081 481 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 PPBPP02775 128 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 RAB9AP51151 201 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 HOXA4Q00056 320 aaPredicted RBP7.12□□□□□ -1.27
GABRA1-202ENST00000393943 SAMD13Q5VXD3 122 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 PSPNO60542 156 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 GLRXP35754 106 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 AMMECR1LQ6DCA0 310 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 MUC15Q8N387 334 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 CST9LQ9H4G1 147 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 SMPXQ9UHP9 88 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms