RNA–Protein interactions for RNA: ENST00000393780.3

GAP43-202, Transcript of growth associated protein 43, humanhuman

TSL 1 (best) BASIC

Gene GAP43, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43-202ENST00000393780 HARBI1Q96MB7 349 aa11.4□□□□□ -0.58
GAP43-202ENST00000393780 COMMD5Q9GZQ3 224 aa11.4□□□□□ -0.58
GAP43-202ENST00000393780 YLPM1P49750 1951 aaKnown RBP11.4□□□□□ -0.59
GAP43-202ENST00000393780 WDFY4Q6ZS81 3184 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 COL8A2P25067 703 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 RPL8P62917 257 aaKnown RBP11.39□□□□□ -0.59
GAP43-202ENST00000393780 FAM27E3Q08E93 113 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 TEX43Q6ZNM6 134 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 Q6ZWC4 215 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 VSTM2AQ8TAG5 236 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 SLC25A2Q9BXI2 301 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 BDP1A6H8Y1 2624 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 TNCP24821 2201 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 SMIM27A0A1W2PRY6 76 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 RNF224P0DH78 156 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 GATA2P23769 480 aaPredicted RBP11.39□□□□□ -0.59
GAP43-202ENST00000393780 OR10J3Q5JRS4 329 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 TMEM136Q6ZRR5 245 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 C22orf34Q6ZV56 151 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 PDPNQ86YL7 162 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 ST6GALNAC3Q8NDV1 305 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 TBX15Q96SF7 602 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 C20orf144Q9BQM9 153 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 DCAF16Q9NXF7 216 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 ZNRD1Q9P1U0 126 aa11.39□□□□□ -0.59
GAP43-202ENST00000393780 CELSR3Q9NYQ7 3312 aa11.38□□□□□ -0.59
GAP43-202ENST00000393780 C17orf100A8MU93 164 aa11.38□□□□□ -0.59
GAP43-202ENST00000393780 ZNF705FA8MVS1 300 aaPredicted RBP11.38□□□□□ -0.59
GAP43-202ENST00000393780 ZNF705DP0CH99 300 aaPredicted RBP11.38□□□□□ -0.59
GAP43-202ENST00000393780 ZNF705BP0CI00 300 aaPredicted RBP11.38□□□□□ -0.59
GAP43-202ENST00000393780 USF2Q15853 346 aaPredicted RBP11.38□□□□□ -0.59
GAP43-202ENST00000393780 TMEM108Q6UXF1 575 aa11.38□□□□□ -0.59
GAP43-202ENST00000393780 DOLPP1Q86YN1 238 aa11.38□□□□□ -0.59
GAP43-202ENST00000393780 RBMXL3Q8N7X1 1067 aaKnown RBP11.38□□□□□ -0.59
GAP43-202ENST00000393780 THAP8Q8NA92 274 aa11.38□□□□□ -0.59
GAP43-202ENST00000393780 OR10W1Q8NGF6 305 aa11.38□□□□□ -0.59
GAP43-202ENST00000393780 OR1L4Q8NGR5 311 aa11.38□□□□□ -0.59
GAP43-202ENST00000393780 RND1Q92730 232 aa11.38□□□□□ -0.59
GAP43-202ENST00000393780 FLYWCH2Q96CP2 140 aaKnown RBP11.38□□□□□ -0.59
GAP43-202ENST00000393780 SNRNP40Q96DI7 357 aaKnown RBP11.38□□□□□ -0.59
GAP43-202ENST00000393780 DNAJC4Q9NNZ3 241 aa11.38□□□□□ -0.59
GAP43-202ENST00000393780 CDC42EP3Q9UKI2 254 aa11.38□□□□□ -0.59
GAP43-202ENST00000393780 EREGO14944 169 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 NUTF2P61970 127 aaKnown RBP11.37□□□□□ -0.59
GAP43-202ENST00000393780 SUMO1P63165 101 aaKnown RBP11.37□□□□□ -0.59
GAP43-202ENST00000393780 MLANAQ16655 118 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 TPTE2P1Q5T6R2 138 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 BAGE3Q86Y29 109 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 BAGE2Q86Y30 109 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 OR5AU1Q8NGC0 362 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 TMEM186Q96B77 213 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 ZNF430Q9H8G1 570 aaPredicted RBP11.37□□□□□ -0.59
GAP43-202ENST00000393780 TNFRSF13BO14836 293 aaPredicted RBP11.37□□□□□ -0.59
GAP43-202ENST00000393780 AMY1AP04745 511 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 CHRNB4P30926 498 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 ZNF137PP52743 207 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 SUB1P53999 127 aaKnown RBP eCLIP11.37□□□□□ -0.59
GAP43-202ENST00000393780 TMEM200BQ69YZ2 307 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 FAM231DQ6ZW35 169 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 SSX8Q7RTT4 187 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 OR4C13Q8NGP0 309 aa11.37□□□□□ -0.59
GAP43-202ENST00000393780 RNASE7Q9H1E1 156 aaKnown RBP11.37□□□□□ -0.59
GAP43-202ENST00000393780 TCRBV4S1A1TA0A5B7 111 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 IZUMO1RA6ND01 250 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 CGB1A6NKQ9 187 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 M0R143 59 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 HLA-DQA1P01909 254 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 FRMD6-AS1P0C7T7 363 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 RAB4AP20338 218 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 BRS3P32247 399 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 UBE2L3P68036 154 aaKnown RBP11.36□□□□□ -0.59
GAP43-202ENST00000393780 ADIPOQQ15848 244 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 IBA57Q5T440 356 aaKnown RBP11.36□□□□□ -0.59
GAP43-202ENST00000393780 RASL11AQ6T310 242 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 DMRTC2Q8IXT2 367 aaPredicted RBP11.36□□□□□ -0.59
GAP43-202ENST00000393780 OR2T6Q8NHC8 308 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 HSPB9Q9BQS6 159 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 SNHG12Q9BXW3 62 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 GNB4Q9HAV0 340 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 NAT8BQ9UHF3 227 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 SVILO95425 2214 aa11.36□□□□□ -0.59
GAP43-202ENST00000393780 TMEM178BH3BS89 294 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 FCN3O75636 299 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 CCL3L1P16619 93 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 BPIFB3P59826 476 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 CCL8P80075 99 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 TOMM20LQ6UXN7 152 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 ST6GALNAC6Q969X2 333 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 PPIAL4EA0A075B759 164 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 PPIAL4DF5H284 164 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 C16orf97H3BN30 126 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 COX7A2P2O60397 106 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 IGLV2-23P01705 113 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 REG1AP05451 166 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 GPX1P07203 203 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 PPIAL4FP0DN26 164 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 WT1-ASQ06250 92 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 PVRIGQ6DKI7 326 aa11.35□□□□□ -0.59
GAP43-202ENST00000393780 WIPF2Q8TF74 440 aaPredicted RBP11.35□□□□□ -0.59
GAP43-202ENST00000393780 MBD6Q96DN6 1003 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms