RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 TXNDC17Q9BRA2 123 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 C19orf24Q9BVV8 132 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 NAV3Q8IVL0 2385 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 IGKV1OR2-108A0A075B7D4 117 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 PAGE4O60829 102 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 MT-ND4LP03901 98 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 CNTFRP26992 372 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 LDLRAD2Q5SZI1 272 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 ABHD5Q8WTS1 349 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 METTL1Q9UBP6 276 aaKnown RBP16.1■□□□□ 0.17
PTPN11-202ENST00000392597 TIMM23O14925 209 aa16.09■□□□□ 0.17
PTPN11-202ENST00000392597 ARL14EPLP0DKL9 152 aa16.09■□□□□ 0.17
PTPN11-202ENST00000392597 FOLR2P14207 255 aa16.09■□□□□ 0.17
PTPN11-202ENST00000392597 TNXAQ16473 311 aa16.09■□□□□ 0.17
PTPN11-202ENST00000392597 SPNS3Q6ZMD2 512 aa16.09■□□□□ 0.17
PTPN11-202ENST00000392597 ARHGAP32A7KAX9 2087 aa16.09■□□□□ 0.17
PTPN11-202ENST00000392597 ZNF727A8MUV8 499 aa16.08■□□□□ 0.17
PTPN11-202ENST00000392597 VENTXO95231 258 aa16.08■□□□□ 0.17
PTPN11-202ENST00000392597 OR10J1P30954 320 aa16.08■□□□□ 0.17
PTPN11-202ENST00000392597 OR4F5Q8NH21 305 aa16.08■□□□□ 0.17
PTPN11-202ENST00000392597 GATAD1Q8WUU5 269 aa16.08■□□□□ 0.17
PTPN11-202ENST00000392597 HIST1H2BAQ96A08 127 aa16.08■□□□□ 0.17
PTPN11-202ENST00000392597 OR4F4Q96R69 305 aa16.08■□□□□ 0.17
PTPN11-202ENST00000392597 SDF2L1Q9HCN8 221 aa16.08■□□□□ 0.17
PTPN11-202ENST00000392597 UTP20O75691 2785 aaKnown RBP16.08■□□□□ 0.16
PTPN11-202ENST00000392597 CXorf65A6NEN9 183 aa16.08■□□□□ 0.16
PTPN11-202ENST00000392597 OOSP1A8MZH6 123 aa16.08■□□□□ 0.16
PTPN11-202ENST00000392597 PDE6DO43924 150 aa16.08■□□□□ 0.16
PTPN11-202ENST00000392597 MT-CO2P00403 227 aa16.08■□□□□ 0.16
PTPN11-202ENST00000392597 FLI1Q01543 452 aaPredicted RBP16.08■□□□□ 0.16
PTPN11-202ENST00000392597 RNF212Q495C1 297 aa16.08■□□□□ 0.16
PTPN11-202ENST00000392597 CYP2G1PQ6ZSU1 146 aa16.08■□□□□ 0.16
PTPN11-202ENST00000392597 CFHR4Q92496 578 aa16.08■□□□□ 0.16
PTPN11-202ENST00000392597 SMIM7Q9BQ49 75 aa16.08■□□□□ 0.16
PTPN11-202ENST00000392597 SRSF8Q9BRL6 282 aaKnown RBP16.08■□□□□ 0.16
PTPN11-202ENST00000392597 C11orf94C9JXX5 98 aa16.07■□□□□ 0.16
PTPN11-202ENST00000392597 ZFP36P26651 326 aaKnown RBP16.07■□□□□ 0.16
PTPN11-202ENST00000392597 PAX2Q02962 417 aa16.07■□□□□ 0.16
PTPN11-202ENST00000392597 MLANAQ16655 118 aa16.07■□□□□ 0.16
PTPN11-202ENST00000392597 SEPSECSQ9HD40 501 aaKnown RBP16.07■□□□□ 0.16
PTPN11-202ENST00000392597 NAT8Q9UHE5 227 aa16.07■□□□□ 0.16
PTPN11-202ENST00000392597 PLXNB1O43157 2135 aa16.07■□□□□ 0.16
PTPN11-202ENST00000392597 PTPN13Q12923 2485 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 TACC2O95359 2948 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 OR2C1O95371 312 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 KLRD1Q13241 179 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 MINOS1Q5TGZ0 78 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 ETFRF1Q6IPR1 90 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 CCDC144NLQ6NUI1 221 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 VMO1Q7Z5L0 202 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 THAP8Q8NA92 274 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 IGFBPL1Q8WX77 278 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 FNDC4Q9H6D8 234 aaPredicted RBP16.06■□□□□ 0.16
PTPN11-202ENST00000392597 MLXQ9UH92 298 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 MINOS1-NBL1R4GNA1 71 aa16.06■□□□□ 0.16
PTPN11-202ENST00000392597 CRYBA1P05813 215 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 COX6B1P14854 86 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 OR1P1Q8NH06 330 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 ISOC2Q96AB3 205 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 TMEM242Q9NWH2 141 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 FUT9Q9Y231 359 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 CORTO00230 105 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 GCHFRP30047 84 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 NPBQ8NG41 125 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 OR2T6Q8NHC8 308 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 ACY3Q96HD9 319 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 YPEL4Q96NS1 127 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 SIRPDQ9H106 197 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 PARLQ9H300 379 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 FBXL15Q9H469 300 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 PRELID1Q9Y255 219 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 HILPDAQ9Y5L2 63 aa16.05■□□□□ 0.16
PTPN11-202ENST00000392597 IGHV2-70DA0A0C4DH43 119 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 TEX22C9J3V5 150 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 F6UZH7 168 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 CLN5O75503 358 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 TSPAN9O75954 239 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 MOSP00540 346 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 CRYGCP07315 174 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 OR5G3P0C626 314 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 LMO4P61968 165 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 TMEM241Q24JQ0 296 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 FAM78BQ5VT40 261 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 RNF2Q99496 336 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 ARL2-SNX15V9GYD0 113 aa16.04■□□□□ 0.16
PTPN11-202ENST00000392597 NDUFA3O95167 84 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 HOXB4P17483 251 aaPredicted RBP16.03■□□□□ 0.16
PTPN11-202ENST00000392597 SELENOTP62341 195 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 SPATA31B1PQ5VZV4 182 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 LHFPL4Q7Z7J7 247 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 RPUSD4Q96CM3 377 aaKnown RBP16.03■□□□□ 0.16
PTPN11-202ENST00000392597 BPESC1Q9GZL8 116 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 NBPF19A0A087WUL8 3843 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 NBR2O15453 112 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 REG1AP05451 166 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 AREGP15514 252 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 GNB1P62873 340 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 SSBP2P81877 361 aaPredicted RBP16.03■□□□□ 0.16
PTPN11-202ENST00000392597 PLGLAQ15195 96 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 MMDQ15546 238 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms