RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 S4R3C0 116 aa12.07□□□□□ -0.48
ZNF541-203ENST00000391901 LY6EQ16553 131 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 C1QL4Q86Z23 238 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 OR4D5Q8NGN0 318 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 IFI27L2Q9H2X8 130 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 CHODLQ9H9P2 273 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 NAPSAO96009 420 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 PRSS1P07477 247 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 MTURNQ8N3F0 131 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 SFRP2Q96HF1 295 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 ZGRF1Q86YA3 2104 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 ETV2O00321 342 aaPredicted RBP12.06□□□□□ -0.48
ZNF541-203ENST00000391901 HLA-DQA1P01909 254 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 AMBPP02760 352 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 HOXA4Q00056 320 aaPredicted RBP12.06□□□□□ -0.48
ZNF541-203ENST00000391901 CGB1A6NKQ9 187 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 SRRM5B3KS81 715 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 IGHV1-46P01743 117 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 PROK2Q9HC23 129 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 ZFP30Q9Y2G7 519 aa12.06□□□□□ -0.48
ZNF541-203ENST00000391901 ATP5IP56385 69 aaPredicted RBP12.05□□□□□ -0.48
ZNF541-203ENST00000391901 CGAP01215 116 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 LCN2P80188 198 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 KIAA1644Q3SXP7 199 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 MAP1LC3CQ9BXW4 147 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 HSPB7Q9UBY9 170 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 DENND4CQ5VZ89 1909 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 NPIPB11E5RHQ5 1161 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 IL4P05112 153 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 NPSP0C0P6 89 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 COX6B1P14854 86 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 FOXL2NBQ6ZUU3 175 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 NCOR1P1Q9H4R4 102 aa12.05□□□□□ -0.48
ZNF541-203ENST00000391901 IGHV3OR16-13A0A075B7E8 117 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 IGHV3-74A0A0B4J1X5 117 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 A8MWP6 167 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 FABP2P12104 132 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 CFPP27918 469 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 DUTP33316 252 aaKnown RBP12.04□□□□□ -0.48
ZNF541-203ENST00000391901 CUL9Q8IWT3 2517 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 SAA1P0DJI8 122 aaPredicted RBP12.04□□□□□ -0.48
ZNF541-203ENST00000391901 TIMP3P35625 211 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 SLC25A34Q6PIV7 304 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 LINC00305Q7Z4B0 112 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 C19orf24Q9BVV8 132 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 SSBP3Q9BWW4 388 aaPredicted RBP12.04□□□□□ -0.48
ZNF541-203ENST00000391901 CDKN1AP38936 164 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 TDGF1P3P51864 188 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 METRNQ9UJH8 293 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 OR2T8A6NH00 312 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 RNASE6Q93091 150 aaKnown RBP12.04□□□□□ -0.48
ZNF541-203ENST00000391901 RAB37Q96AX2 223 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 MEGF9Q9H1U4 602 aa12.04□□□□□ -0.48
ZNF541-203ENST00000391901 PEF1Q9UBV8 284 aaKnown RBP12.04□□□□□ -0.48
ZNF541-203ENST00000391901 CBLN1P23435 193 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 NOTCH2Q04721 2471 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 TMEM177Q53S58 311 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 CXCL1P09341 107 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 ATP5G3P48201 142 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 CENPWQ5EE01 88 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 WNT10AQ9GZT5 417 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 SLC25A15Q9Y619 301 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 IGKV1D-33P01593 117 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 IGKV1-33P01594 117 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 PTPRQQ9UMZ3 2332 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 GOLT1AQ6ZVE7 132 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 HS3ST6Q96QI5 342 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 PIMREGQ9BSJ6 248 aa12.03□□□□□ -0.48
ZNF541-203ENST00000391901 DPRXA6NFQ7 191 aa12.02□□□□□ -0.48
ZNF541-203ENST00000391901 SH2D7A6NKC9 451 aaPredicted RBP12.02□□□□□ -0.48
ZNF541-203ENST00000391901 FOXH1O75593 365 aa12.02□□□□□ -0.48
ZNF541-203ENST00000391901 RPL23P62829 140 aaKnown RBP12.02□□□□□ -0.48
ZNF541-203ENST00000391901 TMEM78Q5T7P6 136 aa12.02□□□□□ -0.48
ZNF541-203ENST00000391901 SPANXN1Q5VSR9 72 aa12.02□□□□□ -0.48
ZNF541-203ENST00000391901 C16orf92Q96LL3 132 aa12.02□□□□□ -0.48
ZNF541-203ENST00000391901 METTL26Q96S19 204 aa12.02□□□□□ -0.48
ZNF541-203ENST00000391901 SNHG12Q9BXW3 62 aa12.02□□□□□ -0.48
ZNF541-203ENST00000391901 MRPL32Q9BYC8 188 aaKnown RBP12.02□□□□□ -0.48
ZNF541-203ENST00000391901 SCGB1C2P0DMR2 95 aa12.02□□□□□ -0.49
ZNF541-203ENST00000391901 LY6DQ14210 128 aa12.02□□□□□ -0.49
ZNF541-203ENST00000391901 TMEM189A5PLL7 270 aa12.02□□□□□ -0.49
ZNF541-203ENST00000391901 OR9G9P0C7N8 305 aa12.02□□□□□ -0.49
ZNF541-203ENST00000391901 SRIP30626 198 aa12.02□□□□□ -0.49
ZNF541-203ENST00000391901 PDLIM4P50479 330 aa12.02□□□□□ -0.49
ZNF541-203ENST00000391901 C1orf194Q5T5A4 169 aa12.02□□□□□ -0.49
ZNF541-203ENST00000391901 VKORC1Q9BQB6 163 aa12.02□□□□□ -0.49
ZNF541-203ENST00000391901 HSPB8Q9UJY1 196 aa12.02□□□□□ -0.49
ZNF541-203ENST00000391901 NUDT3O95989 172 aa12.01□□□□□ -0.49
ZNF541-203ENST00000391901 CD24P25063 80 aa12.01□□□□□ -0.49
ZNF541-203ENST00000391901 TMEM116Q8NCL8 245 aa12.01□□□□□ -0.49
ZNF541-203ENST00000391901 TRAV30A0A087WSZ9 112 aa12.01□□□□□ -0.49
ZNF541-203ENST00000391901 LOC389332A0A1B0GUA5 103 aa12.01□□□□□ -0.49
ZNF541-203ENST00000391901 UPK2O00526 184 aa12.01□□□□□ -0.49
ZNF541-203ENST00000391901 RPL7P18124 248 aaKnown RBP12.01□□□□□ -0.49
ZNF541-203ENST00000391901 PGLYRP4Q96LB8 373 aa12.01□□□□□ -0.49
ZNF541-203ENST00000391901 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.01□□□□□ -0.49
ZNF541-203ENST00000391901 NBEAP1P0C6P0 100 aa12.01□□□□□ -0.49
ZNF541-203ENST00000391901 NEU4Q8WWR8 484 aaPredicted RBP12.01□□□□□ -0.49
ZNF541-203ENST00000391901 WDR87Q6ZQQ6 2873 aa12.01□□□□□ -0.49
ZNF541-203ENST00000391901 IGHV3OR16-8A0A075B7F1 116 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms