RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SAMD13Q5VXD3 122 aa12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 GTF2H5Q6ZYL4 71 aa12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 STPG3Q8N7X2 389 aa12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 CT55Q8WUE5 264 aa12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 PLSCR4Q9NRQ2 329 aa12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 PPOXP50336 477 aa12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 LINC00205P59089 165 aa12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 RAC3P60763 192 aa12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 IGF2BP2-AS1Q96M15 143 aa12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 SSBP3Q9BWW4 388 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 NPVFQ9HCQ7 196 aa12.07□□□□□ -0.48
VPS9D1-201ENST00000389386 PCSK5Q92824 1860 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 GNG7O60262 68 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 OR2H2O95918 312 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 P04436 131 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 OR9G9P0C7N8 305 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 MIR17HGQ75NE6 70 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 MBD6Q96DN6 1003 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 TAAR6Q96RI8 345 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 TMEM191AQ9H0A3 160 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 SH2D2AQ9NP31 389 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 SMPXQ9UHP9 88 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 OR51B2Q9Y5P1 312 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 PPIAL4GP0DN37 164 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 FOXE3Q13461 319 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 PSG5Q15238 335 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 GABRA6Q16445 453 aa12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 WIPI1Q5MNZ9 446 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 SSBP4Q9BWG4 385 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-201ENST00000389386 SERTM2A0A1B0GWG4 89 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 A0A1W2PNU3 283 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 GDF1P27539 372 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 GNG3P63215 75 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 ASPHD1Q5U4P2 390 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 SPINK14Q6IE38 97 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 NUP35Q8NFH5 326 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 MS4A6AQ9H2W1 248 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 HEYLQ9NQ87 328 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 C5orf49A4QMS7 147 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 PINLYPA6NC86 204 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 LINC00473A8K010 186 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 DNPH1O43598 174 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 IGHV3-9P01782 118 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 VDAC2P45880 294 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 SEC11AP67812 179 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 C2orf91Q6ZV80 131 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 WDR31Q8NA23 367 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 DEFB124Q8NES8 71 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 FAM216AQ8WUB2 273 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 TRIB1Q96RU8 372 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 TMEM167BQ9NRX6 74 aa12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 SLC25A10Q9UBX3 287 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-201ENST00000389386 BOD1L1Q8NFC6 3051 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 GGTLC3B5MD39 225 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 PPIAL4DF5H284 164 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 NGFP01138 241 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 OR52E5Q8NH55 327 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 JMJD8Q96S16 334 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 PKIBQ9C010 78 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 SELENOKQ9Y6D0 94 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 COL27A1Q8IZC6 1860 aaPredicted RBP12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 IGHV1-24A0A0C4DH33 117 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 C9orf118A6NHY6 69 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 CXCL13O43927 109 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 HBZP02008 142 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 RAB31Q13636 194 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 ABHD12Q8N2K0 398 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 OR2V2Q96R30 315 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 HES7Q9BYE0 225 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 PRRG4Q9BZD6 226 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 CACNA1DQ01668 2161 aa12.04□□□□□ -0.48
VPS9D1-201ENST00000389386 DSPP15924 2871 aaKnown RBP12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 A0A1B0GV72 72 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 SPAARA0A1B0GVQ0 90 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 K7EP34 96 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 GFRA3O60609 400 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 SS18L1O75177 396 aaPredicted RBP12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 ACTL6BO94805 426 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 FAM162BQ5T6X4 162 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 C6orf15Q6UXA7 325 aaPredicted RBP12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 ZNF355PQ9NSJ1 428 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 LEPROTL1O95214 131 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 TMEM97Q5BJF2 176 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 HES3Q5TGS1 186 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 TEPPQ6URK8 271 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 NHLRC2Q8NBF2 726 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 GALMQ96C23 342 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 ZNF503Q96F45 646 aa12.03□□□□□ -0.48
VPS9D1-201ENST00000389386 PRR20EP86478 221 aa12.02□□□□□ -0.48
VPS9D1-201ENST00000389386 PRR20CP86479 221 aa12.02□□□□□ -0.48
VPS9D1-201ENST00000389386 PRR20DP86480 221 aa12.02□□□□□ -0.48
VPS9D1-201ENST00000389386 PRR20BP86481 221 aa12.02□□□□□ -0.48
VPS9D1-201ENST00000389386 PRR20AP86496 221 aa12.02□□□□□ -0.48
VPS9D1-201ENST00000389386 SRYQ05066 204 aa12.02□□□□□ -0.48
VPS9D1-201ENST00000389386 GCM1Q9NP62 436 aa12.02□□□□□ -0.48
VPS9D1-201ENST00000389386 ANKRD30BLA7E2S9 258 aa12.02□□□□□ -0.49
VPS9D1-201ENST00000389386 C12orf77C9JDV5 145 aa12.02□□□□□ -0.49
VPS9D1-201ENST00000389386 J3QT63 122 aa12.02□□□□□ -0.49
VPS9D1-201ENST00000389386 HAND1O96004 215 aa12.02□□□□□ -0.49
VPS9D1-201ENST00000389386 MT-CO3P00414 261 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms