RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ZNF705BP0CI00 300 aaPredicted RBP2.06□□□□□ -2.08
RNU6-40P-201ENST00000384254 FAM236CP0DP71 79 aa2.06□□□□□ -2.08
RNU6-40P-201ENST00000384254 FAM173BQ6P4H8 233 aa2.06□□□□□ -2.08
RNU6-40P-201ENST00000384254 H1FXQ92522 213 aaKnown RBP2.06□□□□□ -2.08
RNU6-40P-201ENST00000384254 KIFC1Q9BW19 673 aa2.06□□□□□ -2.08
RNU6-40P-201ENST00000384254 MRPL32Q9BYC8 188 aaKnown RBP2.06□□□□□ -2.08
RNU6-40P-201ENST00000384254 YIPF3Q9GZM5 350 aa2.06□□□□□ -2.08
RNU6-40P-201ENST00000384254 C20orf27Q9GZN8 174 aa2.06□□□□□ -2.08
RNU6-40P-201ENST00000384254 NCOA1Q15788 1441 aa2.06□□□□□ -2.08
RNU6-40P-201ENST00000384254 IGKV1D-43A0A0B4J1Z2 117 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 TRBV6-5A0A0K0K1A5 114 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 hADV38S2A0JD32 116 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 PDE6DO43924 150 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 CTXN2P0C2S0 81 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 S100A4P26447 101 aaKnown RBP2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 MRPS15P82914 257 aaKnown RBP2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 ZNF345Q14585 488 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 KISS1Q15726 138 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 MIR17HGQ75NE6 70 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 CLVS1Q8IUQ0 354 aaPredicted RBP2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 DEFB119Q8N690 84 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 GDPD1Q8N9F7 314 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 ZNF439Q8NDP4 499 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 Q96M85 177 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 ARL2BPQ9Y2Y0 163 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 AMMECR1Q9Y4X0 333 aaPredicted RBP2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 CCDC88AQ3V6T2 1871 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 NUMA1Q14980 2115 aa2.05□□□□□ -2.08
RNU6-40P-201ENST00000384254 A0A0D9SG52 128 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 TRAPPC13A5PLN9 417 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 IBA57-AS1B1ANH7 110 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 FADS1O60427 444 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 ATP5HO75947 161 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 HTR1AP08908 422 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 SMIM10L2AP0DMW4 78 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 SMIM10L2BP0DMW5 78 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 NNATQ16517 81 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 Q1T7F1 81 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 FP248Q71RG6 208 aaPredicted RBP2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 OOSP2Q86WS3 158 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 TTC21AQ8NDW8 1320 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 PRAP1Q96NZ9 151 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 NMNAT1Q9HAN9 279 aaPredicted RBP2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 TP73-AS1Q9UF72 201 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 ERGIC3Q9Y282 383 aa2.04□□□□□ -2.08
RNU6-40P-201ENST00000384254 ZFYVE9O95405 1425 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 KIF24Q5T7B8 1368 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 hCG_1818297A0A087WSY0 165 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 FUOMA2VDF0 154 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 A8MT66 165 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 HAND1O96004 215 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 IFNA6P05013 189 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 KRTAP21-3Q3LHN1 58 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 LCN15Q6UWW0 184 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 TRAPPC6BQ86SZ2 158 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 OR51A2Q8NGJ7 313 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 SIGMAR1Q99720 223 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 C14orf105Q9NVL8 296 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 CUL9Q8IWT3 2517 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 RTTNQ86VV8 2226 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 MYH11P35749 1972 aa2.03□□□□□ -2.08
RNU6-40P-201ENST00000384254 RTL1A6NKG5 1358 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 PCDH15Q96QU1 1955 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 ZFHX2Q9C0A1 2572 aaPredicted RBP2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 OR5F1O95221 314 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 SERPINE1P05121 402 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 PPIBP23284 216 aaKnown RBP2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 RUNX1Q01196 453 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 TMED2Q15363 201 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 KHDC3LQ587J8 217 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 DEFB128Q7Z7B8 93 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 HIST3H2BBQ8N257 126 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 OR4E2Q8NGC2 313 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 TERB2Q8NHR7 220 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 PFN4Q8NHR9 129 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 TLNRD1Q9H1K6 362 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 UQCC1Q9NVA1 299 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 LHFPL6Q9Y693 200 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 SORL1Q92673 2214 aa2.02□□□□□ -2.09
RNU6-40P-201ENST00000384254 OR7C1O76099 320 aaPredicted RBP2.01□□□□□ -2.09
RNU6-40P-201ENST00000384254 TCL1BO95988 128 aa2.01□□□□□ -2.09
RNU6-40P-201ENST00000384254 C8GP07360 202 aa2.01□□□□□ -2.09
RNU6-40P-201ENST00000384254 CASP1P29466 404 aa2.01□□□□□ -2.09
RNU6-40P-201ENST00000384254 LIN52Q52LA3 116 aa2.01□□□□□ -2.09
RNU6-40P-201ENST00000384254 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
RNU6-40P-201ENST00000384254 C9orf163Q8N9P6 203 aa2.01□□□□□ -2.09
RNU6-40P-201ENST00000384254 OR4D11Q8NGI4 311 aa2.01□□□□□ -2.09
RNU6-40P-201ENST00000384254 C2orf50Q96LR7 162 aa2.01□□□□□ -2.09
RNU6-40P-201ENST00000384254 SERPINI1Q99574 410 aa2.01□□□□□ -2.09
RNU6-40P-201ENST00000384254 J3QRK9 145 aa2□□□□□ -2.09
RNU6-40P-201ENST00000384254 YPEL3P61236 119 aaPredicted RBP2□□□□□ -2.09
RNU6-40P-201ENST00000384254 C12orf74Q32Q52 190 aa2□□□□□ -2.09
RNU6-40P-201ENST00000384254 OR5A1Q8NGJ0 315 aa2□□□□□ -2.09
RNU6-40P-201ENST00000384254 RNASE7Q9H1E1 156 aaKnown RBP2□□□□□ -2.09
RNU6-40P-201ENST00000384254 IDI2-AS1Q9NZ38 188 aa2□□□□□ -2.09
RNU6-40P-201ENST00000384254 TOPBP1Q92547 1522 aa2□□□□□ -2.09
RNU6-40P-201ENST00000384254 PIK3C2GO75747 1445 aa2□□□□□ -2.09
RNU6-40P-201ENST00000384254 TONSLQ96HA7 1378 aa1.99□□□□□ -2.09
RNU6-40P-201ENST00000384254 SMARCA4P51532 1647 aa1.99□□□□□ -2.09
RNU6-40P-201ENST00000384254 SMIM17P0DL12 118 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms