RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 ATP6V0E1O15342 81 aa21.17■□□□□ 0.98
MSX1-201ENST00000382723 OPRK1P41145 380 aa21.17■□□□□ 0.98
MSX1-201ENST00000382723 OR2G3Q8NGZ4 309 aa21.17■□□□□ 0.98
MSX1-201ENST00000382723 RNASEH2CQ8TDP1 164 aaKnown RBP21.17■□□□□ 0.98
MSX1-201ENST00000382723 BTBD17A6NE02 478 aa21.17■□□□□ 0.98
MSX1-201ENST00000382723 CTRB1P17538 263 aa21.17■□□□□ 0.98
MSX1-201ENST00000382723 CTRB2Q6GPI1 263 aa21.17■□□□□ 0.98
MSX1-201ENST00000382723 PARD6GQ9BYG4 376 aaPredicted RBP21.17■□□□□ 0.98
MSX1-201ENST00000382723 DMRT1Q9Y5R6 373 aa21.17■□□□□ 0.98
MSX1-201ENST00000382723 NAV3Q8IVL0 2385 aa21.17■□□□□ 0.98
MSX1-201ENST00000382723 AKR1C1Q04828 323 aa21.16■□□□□ 0.98
MSX1-201ENST00000382723 CD69Q07108 199 aa21.16■□□□□ 0.98
MSX1-201ENST00000382723 BTNL8Q6UX41 500 aa21.16■□□□□ 0.98
MSX1-201ENST00000382723 TREML4Q6UXN2 200 aa21.16■□□□□ 0.98
MSX1-201ENST00000382723 TMEM182Q6ZP80 229 aaPredicted RBP21.16■□□□□ 0.98
MSX1-201ENST00000382723 OR5R1Q8NH85 324 aa21.16■□□□□ 0.98
MSX1-201ENST00000382723 IGHV3-48P01763 117 aa21.16■□□□□ 0.98
MSX1-201ENST00000382723 PRH1P02810 166 aa21.16■□□□□ 0.98
MSX1-201ENST00000382723 ECSCRQ19T08 205 aa21.16■□□□□ 0.98
MSX1-201ENST00000382723 FNDC4Q9H6D8 234 aaPredicted RBP21.16■□□□□ 0.98
MSX1-201ENST00000382723 NPVFQ9HCQ7 196 aa21.16■□□□□ 0.98
MSX1-201ENST00000382723 OTOGQ6ZRI0 2925 aa21.15■□□□□ 0.98
MSX1-201ENST00000382723 RPS10-NUDT3A0A1W2PQS6 291 aa21.15■□□□□ 0.98
MSX1-201ENST00000382723 M0QZK8 103 aa21.15■□□□□ 0.98
MSX1-201ENST00000382723 HOXA3O43365 443 aaPredicted RBP21.15■□□□□ 0.98
MSX1-201ENST00000382723 SLC16A13Q7RTY0 426 aa21.15■□□□□ 0.98
MSX1-201ENST00000382723 C16orf82Q7Z2V1 217 aa21.15■□□□□ 0.98
MSX1-201ENST00000382723 OR5T1Q8NG75 326 aa21.15■□□□□ 0.98
MSX1-201ENST00000382723 OR2T6Q8NHC8 308 aa21.15■□□□□ 0.98
MSX1-201ENST00000382723 SGMS2Q8NHU3 365 aa21.15■□□□□ 0.98
MSX1-201ENST00000382723 WDR83OSQ9Y284 106 aa21.15■□□□□ 0.98
MSX1-201ENST00000382723 TLN2Q9Y4G6 2542 aa21.15■□□□□ 0.98
MSX1-201ENST00000382723 GAMTQ14353 236 aa21.14■□□□□ 0.98
MSX1-201ENST00000382723 PVRIGQ6DKI7 326 aa21.14■□□□□ 0.98
MSX1-201ENST00000382723 SIGLECL1Q8N7X8 197 aa21.14■□□□□ 0.98
MSX1-201ENST00000382723 TMUB1Q9BVT8 246 aa21.14■□□□□ 0.98
MSX1-201ENST00000382723 ACANP16112 2415 aa21.14■□□□□ 0.97
MSX1-201ENST00000382723 IGHV3-21A0A0B4J1V1 117 aa21.14■□□□□ 0.97
MSX1-201ENST00000382723 MDKP21741 143 aaPredicted RBP21.14■□□□□ 0.97
MSX1-201ENST00000382723 GPX4P36969 197 aaPredicted RBP21.14■□□□□ 0.97
MSX1-201ENST00000382723 BLCAPP62952 87 aa21.14■□□□□ 0.97
MSX1-201ENST00000382723 CLLU1Q5K131 121 aa21.14■□□□□ 0.97
MSX1-201ENST00000382723 UNQ5815/PRO19632Q6UWF5 114 aa21.14■□□□□ 0.97
MSX1-201ENST00000382723 TTC9CQ8N5M4 171 aa21.14■□□□□ 0.97
MSX1-201ENST00000382723 RNF141Q8WVD5 230 aa21.14■□□□□ 0.97
MSX1-201ENST00000382723 NPIPB5A8MRT5 1133 aa21.13■□□□□ 0.97
MSX1-201ENST00000382723 CRYGCP07315 174 aa21.13■□□□□ 0.97
MSX1-201ENST00000382723 NMBP08949 121 aa21.13■□□□□ 0.97
MSX1-201ENST00000382723 FAM157CP0CG43 387 aa21.13■□□□□ 0.97
MSX1-201ENST00000382723 HNF1AP20823 631 aa21.13■□□□□ 0.97
MSX1-201ENST00000382723 ACY3Q96HD9 319 aa21.13■□□□□ 0.97
MSX1-201ENST00000382723 SLC35E1Q96K37 410 aa21.13■□□□□ 0.97
MSX1-201ENST00000382723 NPCDR1Q9BY65 106 aa21.13■□□□□ 0.97
MSX1-201ENST00000382723 PRDM13Q9H4Q3 707 aa21.13■□□□□ 0.97
MSX1-201ENST00000382723 VPREB3Q9UKI3 123 aa21.13■□□□□ 0.97
MSX1-201ENST00000382723 S100A1P23297 94 aa21.12■□□□□ 0.97
MSX1-201ENST00000382723 CACNG8Q8WXS5 425 aa21.12■□□□□ 0.97
MSX1-201ENST00000382723 SULT1A2P50226 295 aa21.12■□□□□ 0.97
MSX1-201ENST00000382723 ZNF709Q8N972 641 aa21.12■□□□□ 0.97
MSX1-201ENST00000382723 ZNF705EA8MWA4 302 aaPredicted RBP21.11■□□□□ 0.97
MSX1-201ENST00000382723 FNDC10F2Z333 226 aa21.11■□□□□ 0.97
MSX1-201ENST00000382723 G3V318 75 aa21.11■□□□□ 0.97
MSX1-201ENST00000382723 CORTO00230 105 aa21.11■□□□□ 0.97
MSX1-201ENST00000382723 TEPPQ6URK8 271 aa21.11■□□□□ 0.97
MSX1-201ENST00000382723 LINC00527Q9UJ94 153 aa21.11■□□□□ 0.97
MSX1-201ENST00000382723 MXRA5Q9NR99 2828 aa21.11■□□□□ 0.97
MSX1-201ENST00000382723 LY6G6DO95868 133 aa21.1■□□□□ 0.97
MSX1-201ENST00000382723 MT-CO2P00403 227 aa21.1■□□□□ 0.97
MSX1-201ENST00000382723 Q6ZS46 218 aa21.1■□□□□ 0.97
MSX1-201ENST00000382723 MGST2Q99735 147 aa21.1■□□□□ 0.97
MSX1-201ENST00000382723 PSMG3Q9BT73 122 aaPredicted RBP21.1■□□□□ 0.97
MSX1-201ENST00000382723 SLC35E3Q7Z769 313 aa21.1■□□□□ 0.97
MSX1-201ENST00000382723 DUX5Q96PT3 197 aa21.1■□□□□ 0.97
MSX1-201ENST00000382723 LSM4Q9Y4Z0 139 aaKnown RBP21.1■□□□□ 0.97
MSX1-201ENST00000382723 FHITP49789 147 aa21.09■□□□□ 0.97
MSX1-201ENST00000382723 ELLP55199 621 aaPredicted RBP21.09■□□□□ 0.97
MSX1-201ENST00000382723 ETFRF1Q6IPR1 90 aa21.09■□□□□ 0.97
MSX1-201ENST00000382723 OR1L6Q8NGR2 347 aa21.09■□□□□ 0.97
MSX1-201ENST00000382723 CXorf58Q96LI9 332 aa21.09■□□□□ 0.97
MSX1-201ENST00000382723 MRPL36Q9P0J6 103 aaKnown RBP21.09■□□□□ 0.97
MSX1-201ENST00000382723 TIMM9Q9Y5J7 89 aa21.09■□□□□ 0.97
MSX1-201ENST00000382723 MPDU1O75352 247 aa21.08■□□□□ 0.97
MSX1-201ENST00000382723 CAMLGP49069 296 aa21.08■□□□□ 0.97
MSX1-201ENST00000382723 AKR1C8PQ5T2L2 129 aa21.08■□□□□ 0.97
MSX1-201ENST00000382723 TMEM144Q7Z5S9 345 aa21.08■□□□□ 0.97
MSX1-201ENST00000382723 NPIPB3Q92617 1050 aa21.08■□□□□ 0.97
MSX1-201ENST00000382723 C17orf112F2Z3M2 114 aa21.08■□□□□ 0.96
MSX1-201ENST00000382723 IGHG2P01859 326 aa21.08■□□□□ 0.96
MSX1-201ENST00000382723 FANCD2OSQ96PS1 177 aa21.08■□□□□ 0.96
MSX1-201ENST00000382723 IGKV1OR2-108A0A075B7D4 117 aa21.07■□□□□ 0.96
MSX1-201ENST00000382723 AGPAT2O15120 278 aa21.07■□□□□ 0.96
MSX1-201ENST00000382723 RND2P52198 227 aa21.07■□□□□ 0.96
MSX1-201ENST00000382723 AKIRIN2Q53H80 203 aa21.07■□□□□ 0.96
MSX1-201ENST00000382723 FAM110DQ8TAY7 271 aaPredicted RBP21.07■□□□□ 0.96
MSX1-201ENST00000382723 LRRC20Q8TCA0 184 aa21.07■□□□□ 0.96
MSX1-201ENST00000382723 FLNBO75369 2602 aaKnown RBP21.07■□□□□ 0.96
MSX1-201ENST00000382723 TRAV41A0A0B4J266 112 aa21.06■□□□□ 0.96
MSX1-201ENST00000382723 I3L2K1 104 aa21.06■□□□□ 0.96
MSX1-201ENST00000382723 CENPVQ7Z7K6 275 aaPredicted RBP21.06■□□□□ 0.96
MSX1-201ENST00000382723 FAM213BQ8TBF2 198 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms