RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 CMC4P56277 68 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-202ENST00000381208 Q56UQ5 140 aa9.7□□□□□ -0.86
RPAIN-202ENST00000381208 Q6ZWC4 215 aa9.7□□□□□ -0.86
RPAIN-202ENST00000381208 H2BFWTQ7Z2G1 175 aa9.7□□□□□ -0.86
RPAIN-202ENST00000381208 OR4A16Q8NH70 328 aa9.7□□□□□ -0.86
RPAIN-202ENST00000381208 ZNF486Q96H40 463 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-202ENST00000381208 ARPC5LQ9BPX5 153 aa9.7□□□□□ -0.86
RPAIN-202ENST00000381208 CCDC32Q9BV29 185 aa9.7□□□□□ -0.86
RPAIN-202ENST00000381208 NSG2Q9Y328 171 aa9.7□□□□□ -0.86
RPAIN-202ENST00000381208 IGHV3-35A0A0C4DH35 117 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 KIR2DL5BA0A0G2JN68 375 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 KIR2DL5BA0A0G2JPC4 375 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 FAM25AB3EWG3 89 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 FAM25CB3EWG5 89 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 FAM25GB3EWG6 89 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 K7EIM0 57 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 ATG12O94817 140 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 CD5P06127 495 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 EIF4EP06730 217 aaKnown RBP9.69□□□□□ -0.86
RPAIN-202ENST00000381208 BMI1P35226 326 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 ERHP84090 104 aaKnown RBP9.69□□□□□ -0.86
RPAIN-202ENST00000381208 PHLDA2Q53GA4 152 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 Q6ZNX1 250 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 TBC1D26Q86UD7 250 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 CCDC190Q86UF4 302 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 WFDC3Q8IUB2 231 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 KIR2DL5AQ8N109 375 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 ZNF114Q8NC26 417 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 KIR2DL5BQ8NHK3 375 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 C15orf40Q8WUR7 153 aa9.69□□□□□ -0.86
RPAIN-202ENST00000381208 RGS5O15539 181 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 HPGDSO60760 199 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 UPK1BO75841 260 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 TBPP20226 339 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 MFAP4P55083 255 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 PRCDQ00LT1 54 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 SNX29P2Q8IUI4 249 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 UBAC2Q8NBM4 344 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 PPP1R14BQ96C90 147 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 SEC22AQ96IW7 307 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 OVOL2Q9BRP0 275 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 CHRDL1Q9BU40 450 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 C20orf24Q9BUV8 137 aa9.68□□□□□ -0.86
RPAIN-202ENST00000381208 ELK1P19419 428 aa9.67□□□□□ -0.86
RPAIN-202ENST00000381208 MFAP2P55001 183 aa9.67□□□□□ -0.86
RPAIN-202ENST00000381208 DEFA1P59665 94 aa9.67□□□□□ -0.86
RPAIN-202ENST00000381208 DEFA3P59666 94 aa9.67□□□□□ -0.86
RPAIN-202ENST00000381208 RND3P61587 244 aa9.67□□□□□ -0.86
RPAIN-202ENST00000381208 HSPE1P61604 102 aaKnown RBP9.67□□□□□ -0.86
RPAIN-202ENST00000381208 TRIM16LQ309B1 348 aa9.67□□□□□ -0.86
RPAIN-202ENST00000381208 ARRDC1Q8N5I2 433 aa9.67□□□□□ -0.86
RPAIN-202ENST00000381208 STPG3Q8N7X2 389 aa9.67□□□□□ -0.86
RPAIN-202ENST00000381208 DNAH1Q9P2D7 4330 aa9.67□□□□□ -0.86
RPAIN-202ENST00000381208 A0A1B0GVG6 124 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 F8W735 103 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-202ENST00000381208 B3GALNT1O75752 331 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 CTSGP08311 255 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 ATF4P18848 351 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-202ENST00000381208 ADMP35318 185 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 RNASE10Q5GAN6 216 aaKnown RBP9.66□□□□□ -0.86
RPAIN-202ENST00000381208 CENPSQ8N2Z9 138 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 TMEM217Q8N7C4 229 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 GALNT14Q96FL9 552 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 OR10C1Q96KK4 312 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 GINS3Q9BRX5 216 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 SMPXQ9UHP9 88 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 SELENOKQ9Y6D0 94 aa9.66□□□□□ -0.86
RPAIN-202ENST00000381208 IGHV3-21A0A0B4J1V1 117 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 IGHV7-4-1A0A0J9YVY3 117 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 INS-IGF2F8WCM5 200 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 I3L2K1 104 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 CTDSP2O14595 271 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 SPRY2O43597 315 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 PFDN1O60925 122 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 YIF1AO95070 293 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 PGAM2P15259 253 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 TNFSF8P32971 234 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 NPBWR1P48145 328 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 PAFAH1B2P68402 229 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 TNFRSF9Q07011 255 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 OXA1LQ15070 435 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 MRGPRFQ96AM1 343 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 MISP3Q96FF7 219 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 EXTL2Q9UBQ6 330 aa9.65□□□□□ -0.86
RPAIN-202ENST00000381208 TRAV14DV4A0A0A6YYC5 116 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 DBX1A6NMT0 343 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 CORTO00230 105 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 GNG7O60262 68 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 SCGB2A1O75556 95 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 PTTG1O95997 202 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 MT-CO2P00403 227 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 CTSDP07339 412 aaPredicted RBP9.64□□□□□ -0.87
RPAIN-202ENST00000381208 SNCAP37840 140 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 SUB1P53999 127 aaKnown RBP eCLIP9.64□□□□□ -0.87
RPAIN-202ENST00000381208 ODF3L2Q3SX64 289 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 LHFPL1Q86WI0 220 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 CCDC71LQ8N9Z2 235 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 TMEM116Q8NCL8 245 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 DUSP18Q8NEJ0 188 aa9.64□□□□□ -0.87
RPAIN-202ENST00000381208 ZFAND1Q8TCF1 268 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms