RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ATP5G2Q06055 141 aa9.81□□□□□ -0.84
SMN1-202ENST00000380707 FCN2Q15485 313 aa9.81□□□□□ -0.84
SMN1-202ENST00000380707 PVRIGQ6DKI7 326 aa9.81□□□□□ -0.84
SMN1-202ENST00000380707 C8orf86Q6ZUL3 223 aa9.81□□□□□ -0.84
SMN1-202ENST00000380707 SLC24A4Q8NFF2 622 aa9.81□□□□□ -0.84
SMN1-202ENST00000380707 OR11H7Q8NGC8 314 aa9.81□□□□□ -0.84
SMN1-202ENST00000380707 OR1L6Q8NGR2 347 aa9.81□□□□□ -0.84
SMN1-202ENST00000380707 RCL1Q9Y2P8 373 aaKnown RBP9.81□□□□□ -0.84
SMN1-202ENST00000380707 S4R3C0 116 aa9.81□□□□□ -0.84
SMN1-202ENST00000380707 U3KQ87 197 aa9.81□□□□□ -0.84
SMN1-202ENST00000380707 IGHV3-21A0A0B4J1V1 117 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 MFSD2BA6NFX1 497 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 NUDT19A8MXV4 375 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 CYB5BO43169 146 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 IFNA10P01566 189 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 SUB1P53999 127 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMN1-202ENST00000380707 RRAS2P62070 204 aaPredicted RBP9.8□□□□□ -0.84
SMN1-202ENST00000380707 DEFB136Q30KP8 78 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 C2orf83Q53S99 150 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 C4orf3Q8WVX3 66 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 MISP3Q96FF7 219 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 CIB3Q96Q77 187 aaPredicted RBP9.8□□□□□ -0.84
SMN1-202ENST00000380707 NMES1Q9C002 83 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 THYN1Q9P016 225 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 WNK1Q9H4A3 2382 aa9.8□□□□□ -0.84
SMN1-202ENST00000380707 I3L2K1 104 aa9.79□□□□□ -0.84
SMN1-202ENST00000380707 K7EIM0 57 aa9.79□□□□□ -0.84
SMN1-202ENST00000380707 K7EPK0 472 aa9.79□□□□□ -0.84
SMN1-202ENST00000380707 IGHV3-23P01764 117 aa9.79□□□□□ -0.84
SMN1-202ENST00000380707 LGALS1P09382 135 aaKnown RBP9.79□□□□□ -0.84
SMN1-202ENST00000380707 NPY1RP25929 384 aa9.79□□□□□ -0.84
SMN1-202ENST00000380707 PAX9P55771 341 aa9.79□□□□□ -0.84
SMN1-202ENST00000380707 RAB32Q13637 225 aa9.79□□□□□ -0.84
SMN1-202ENST00000380707 PINX1Q96BK5 328 aaKnown RBP9.79□□□□□ -0.84
SMN1-202ENST00000380707 DUX3Q96PT4 197 aa9.79□□□□□ -0.84
SMN1-202ENST00000380707 LSM5Q9Y4Y9 91 aaKnown RBP9.79□□□□□ -0.84
SMN1-202ENST00000380707 C15orf62A8K5M9 175 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 H3BP45 60 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 MT-CO2P00403 227 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 IGHV3-48P01763 117 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 S100A10P60903 97 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 CYCSP99999 105 aaKnown RBP9.78□□□□□ -0.84
SMN1-202ENST00000380707 RUNX1Q01196 453 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 EXOSC2Q13868 293 aaKnown RBP9.78□□□□□ -0.84
SMN1-202ENST00000380707 MLANAQ16655 118 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 SPANXN5Q5MJ07 72 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 ZNF343Q6P1L6 599 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 Q6ZNX1 250 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 SCARB1Q8WTV0 552 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 RAX2Q96IS3 184 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 SMIM8Q96KF7 97 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 OR4C12Q96R67 309 aa9.78□□□□□ -0.84
SMN1-202ENST00000380707 ANKRD34BA5PLL1 514 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 TRBV12-3P01733 135 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 LRRC37A5PQ49AS3 106 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 OR11H1Q8NG94 326 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 VN1R17PQ8TDU5 208 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 PPP1R1CQ8WVI7 109 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 CXorf58Q96LI9 332 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 CCDC140Q96MF4 163 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 RAB40CQ96S21 281 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 C11orf1Q9H5F2 150 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 FNDC4Q9H6D8 234 aaPredicted RBP9.77□□□□□ -0.84
SMN1-202ENST00000380707 PSENENQ9NZ42 101 aa9.77□□□□□ -0.84
SMN1-202ENST00000380707 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.77□□□□□ -0.85
SMN1-202ENST00000380707 TRBV7-1A0A0A6YYK4 115 aa9.77□□□□□ -0.85
SMN1-202ENST00000380707 M0QZ24 198 aa9.77□□□□□ -0.85
SMN1-202ENST00000380707 CORTO00230 105 aa9.77□□□□□ -0.85
SMN1-202ENST00000380707 LY86O95711 162 aa9.77□□□□□ -0.85
SMN1-202ENST00000380707 TSPAN15O95858 294 aa9.77□□□□□ -0.85
SMN1-202ENST00000380707 ATP5IP56385 69 aaPredicted RBP9.77□□□□□ -0.85
SMN1-202ENST00000380707 TAS2R30P59541 319 aa9.77□□□□□ -0.85
SMN1-202ENST00000380707 RPP30P78346 268 aaKnown RBP9.77□□□□□ -0.85
SMN1-202ENST00000380707 ETV3LQ6ZN32 361 aa9.77□□□□□ -0.85
SMN1-202ENST00000380707 ZNF502Q8TBZ5 544 aa9.77□□□□□ -0.85
SMN1-202ENST00000380707 RNASEH2CQ8TDP1 164 aaKnown RBP9.77□□□□□ -0.85
SMN1-202ENST00000380707 EEF1AKMT3Q96AZ1 226 aa9.77□□□□□ -0.85
SMN1-202ENST00000380707 ZNF436Q9C0F3 470 aaPredicted RBP9.77□□□□□ -0.85
SMN1-202ENST00000380707 PEF1Q9UBV8 284 aaKnown RBP9.77□□□□□ -0.85
SMN1-202ENST00000380707 PAIP2BQ9ULR5 123 aaKnown RBP9.77□□□□□ -0.85
SMN1-202ENST00000380707 STRAPQ9Y3F4 350 aaKnown RBP9.77□□□□□ -0.85
SMN1-202ENST00000380707 IGHV4OR15-8A0A075B7B6 117 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 A0A087WW49 117 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 F8W735 103 aaPredicted RBP9.76□□□□□ -0.85
SMN1-202ENST00000380707 H0YIZ8 118 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 CCL24O00175 119 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 DEDDO75618 318 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 IFNA4P05014 189 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 CLEC3BP05452 202 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 OPRK1P41145 380 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 CLEC19AQ6UXS0 136 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 NOXA1Q86UR1 476 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 OR4F17Q8NGA8 305 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 OR1N2Q8NGR9 330 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 OR4F4Q96R69 305 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 C21orf62Q9NYP8 219 aa9.76□□□□□ -0.85
SMN1-202ENST00000380707 MRPL36Q9P0J6 103 aaKnown RBP9.76□□□□□ -0.85
SMN1-202ENST00000380707 PPP5D1E7EU14 171 aa9.75□□□□□ -0.85
SMN1-202ENST00000380707 L7N2F9 121 aa9.75□□□□□ -0.85
SMN1-202ENST00000380707 TSC22D2O75157 780 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms