RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 RPL23P62829 140 aaKnown RBP18.6■□□□□ 0.57
VPS16-201ENST00000380443 PSG5Q15238 335 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 CST9LP1Q5W188 147 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 ANAPC16Q96DE5 110 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 TMEM167BQ9NRX6 74 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 TNCP24821 2201 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 LOC105371242A0A075B767 164 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 S100A6P06703 90 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 TAS2R45P59539 299 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 ADIRFQ15847 76 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 MRGPRG-AS1Q2M3A8 158 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 SSBP3Q9BWW4 388 aaPredicted RBP18.6■□□□□ 0.57
VPS16-201ENST00000380443 TECRQ9NZ01 308 aaKnown RBP18.6■□□□□ 0.57
VPS16-201ENST00000380443 SIGLEC9Q9Y336 463 aa18.6■□□□□ 0.57
VPS16-201ENST00000380443 C22orf46C9J442 243 aa18.59■□□□□ 0.57
VPS16-201ENST00000380443 E7EUB6 86 aa18.59■□□□□ 0.57
VPS16-201ENST00000380443 CEACAM3P40198 252 aa18.59■□□□□ 0.57
VPS16-201ENST00000380443 RPL27AP46776 148 aaKnown RBP18.59■□□□□ 0.57
VPS16-201ENST00000380443 ZFP82Q8N141 532 aa18.59■□□□□ 0.57
VPS16-201ENST00000380443 Q8WTZ3 238 aa18.59■□□□□ 0.57
VPS16-201ENST00000380443 MRPL32Q9BYC8 188 aaKnown RBP18.59■□□□□ 0.57
VPS16-201ENST00000380443 SEPSECSQ9HD40 501 aaKnown RBP18.59■□□□□ 0.57
VPS16-201ENST00000380443 MALRD1Q5VYJ5 2156 aa18.59■□□□□ 0.57
VPS16-201ENST00000380443 OR5G3P0C626 314 aa18.58■□□□□ 0.57
VPS16-201ENST00000380443 SELENOTP62341 195 aa18.58■□□□□ 0.57
VPS16-201ENST00000380443 PAX2Q02962 417 aa18.58■□□□□ 0.57
VPS16-201ENST00000380443 FAM78BQ5VT40 261 aa18.58■□□□□ 0.57
VPS16-201ENST00000380443 PQLC2Q6ZP29 291 aa18.58■□□□□ 0.57
VPS16-201ENST00000380443 KIR3DL3Q8N743 410 aa18.58■□□□□ 0.57
VPS16-201ENST00000380443 ITLN2Q8WWU7 325 aaPredicted RBP18.58■□□□□ 0.57
VPS16-201ENST00000380443 SRSF8Q9BRL6 282 aaKnown RBP18.58■□□□□ 0.57
VPS16-201ENST00000380443 IGKV1OR2-108A0A075B7D4 117 aa18.58■□□□□ 0.56
VPS16-201ENST00000380443 A0A1W2PPI3 338 aa18.58■□□□□ 0.56
VPS16-201ENST00000380443 CORTO00230 105 aa18.58■□□□□ 0.56
VPS16-201ENST00000380443 AREGP15514 252 aa18.58■□□□□ 0.56
VPS16-201ENST00000380443 COX7A1P24310 79 aa18.58■□□□□ 0.56
VPS16-201ENST00000380443 HTR1DP28221 377 aa18.58■□□□□ 0.56
VPS16-201ENST00000380443 SRSF1Q07955 248 aaKnown RBP eCLIP18.58■□□□□ 0.56
VPS16-201ENST00000380443 SSX2Q16385 188 aa18.58■□□□□ 0.56
VPS16-201ENST00000380443 THAP8Q8NA92 274 aa18.58■□□□□ 0.56
VPS16-201ENST00000380443 RITA1Q96K30 269 aa18.58■□□□□ 0.56
VPS16-201ENST00000380443 TRBV24-1A0A075B6N3 115 aa18.57■□□□□ 0.56
VPS16-201ENST00000380443 PRTN3P24158 256 aa18.57■□□□□ 0.56
VPS16-201ENST00000380443 TPTE2P1Q5T6R2 138 aa18.57■□□□□ 0.56
VPS16-201ENST00000380443 C2CD4CQ8TF44 421 aa18.57■□□□□ 0.56
VPS16-201ENST00000380443 DPM3Q9P2X0 92 aa18.57■□□□□ 0.56
VPS16-201ENST00000380443 IGHV3-72A0A0B4J1Y9 119 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 IGLC7A0M8Q6 106 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 CD99P14209 185 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 RPS10P46783 165 aaKnown RBP18.56■□□□□ 0.56
VPS16-201ENST00000380443 ATP5G3P48201 142 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 UBE2G2P60604 165 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 GNB1P62873 340 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 PPP1R27Q86WC6 154 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 UHRF2Q96PU4 802 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 FLNCQ14315 2725 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 C5orf52A6NGY3 159 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 NPPCP23582 126 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 GPR6P46095 362 aaPredicted RBP18.56■□□□□ 0.56
VPS16-201ENST00000380443 C10orf55Q5SWW7 151 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 OR1L4Q8NGR5 311 aa18.56■□□□□ 0.56
VPS16-201ENST00000380443 HIVEP3Q5T1R4 2406 aa18.55■□□□□ 0.56
VPS16-201ENST00000380443 A6NNC1 897 aa18.55■□□□□ 0.56
VPS16-201ENST00000380443 TNXAQ16473 311 aa18.55■□□□□ 0.56
VPS16-201ENST00000380443 ZNF343Q6P1L6 599 aa18.55■□□□□ 0.56
VPS16-201ENST00000380443 PFDN5Q99471 154 aa18.55■□□□□ 0.56
VPS16-201ENST00000380443 TPSG1Q9NRR2 321 aa18.55■□□□□ 0.56
VPS16-201ENST00000380443 METTL1Q9UBP6 276 aaKnown RBP18.55■□□□□ 0.56
VPS16-201ENST00000380443 H7BYZ3 331 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 LY6HO94772 140 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 CRYGCP07315 174 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 CXCL1P09341 107 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 S100PP25815 95 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 MLANAQ16655 118 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 SPATA31B1PQ5VZV4 182 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 OR1P1Q8NH06 330 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 OR2T6Q8NHC8 308 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 C22orf15Q8WYQ4 148 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 C11orf52Q96A22 123 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 ACY3Q96HD9 319 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 FAM210BQ96KR6 192 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 OR5B12Q96R08 314 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 URGCP-MRPS24S4R325 110 aa18.54■□□□□ 0.56
VPS16-201ENST00000380443 TCRBV4S1A1TA0A5B7 111 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 PPP1R2P9O14990 202 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 ARF6P62330 175 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 MIR17HGQ75NE6 70 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 C16orf82Q7Z2V1 217 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 ODF3BA8MYP8 253 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 OOSP1A8MZH6 123 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 NDUFB4O95168 129 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 GOSR1O95249 250 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 C8orf88P0DMB2 117 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 FNDC4Q9H6D8 234 aaPredicted RBP18.53■□□□□ 0.56
VPS16-201ENST00000380443 DNAJC4Q9NNZ3 241 aa18.53■□□□□ 0.56
VPS16-201ENST00000380443 TGIF2-C20orf24A0A0A6YYL0 155 aa18.52■□□□□ 0.56
VPS16-201ENST00000380443 UBE2CO00762 179 aa18.52■□□□□ 0.56
VPS16-201ENST00000380443 EFNA4P52798 201 aa18.52■□□□□ 0.56
VPS16-201ENST00000380443 LY96Q9Y6Y9 160 aa18.52■□□□□ 0.56
VPS16-201ENST00000380443 BPIFB3P59826 476 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms