RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 IGHV1-24A0A0C4DH33 117 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 FGF6P10767 208 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 ZNF542PQ5EBM4 170 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 FAM162BQ5T6X4 162 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 C3orf56Q8N813 242 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 ADTRPQ96IZ2 230 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 KIR2DL4Q99706 377 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 MAP1LC3AQ9H492 121 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 HCFC1P51610 2035 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 KIAA1549LQ6ZVL6 1849 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 CLDN14O95500 239 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 PPYP01298 95 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 RTL8BQ17RB0 113 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 ANKRD37Q7Z713 158 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 OR9G4Q8NGQ1 327 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 RNASE7Q9H1E1 156 aaKnown RBP7.76□□□□□ -1.17
PTPRA-204ENST00000380393 PRTFDC1Q9NRG1 225 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 F11RQ9Y624 299 aaKnown RBP7.76□□□□□ -1.17
PTPRA-204ENST00000380393 SOX21Q9Y651 276 aaPredicted RBP7.76□□□□□ -1.17
PTPRA-204ENST00000380393 MUC22E2RYF6 1773 aaPredicted RBP7.76□□□□□ -1.17
PTPRA-204ENST00000380393 IGLV1-36A0A0B4J1U3 117 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 FCN3O75636 299 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 RPL31P62899 125 aaKnown RBP7.76□□□□□ -1.17
PTPRA-204ENST00000380393 GAGE2BQ13066 116 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 KLF5Q13887 457 aaPredicted RBP7.76□□□□□ -1.17
PTPRA-204ENST00000380393 GAGE2EQ4V326 116 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 NT5CQ8TCD5 201 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 COL25A1Q9BXS0 654 aaPredicted RBP7.76□□□□□ -1.17
PTPRA-204ENST00000380393 RAB9BQ9NP90 201 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 GAGE2DQ9UEU5 116 aa7.76□□□□□ -1.17
PTPRA-204ENST00000380393 TECTAO75443 2155 aa7.75□□□□□ -1.17
PTPRA-204ENST00000380393 A0A0G2JRQ6 117 aa7.75□□□□□ -1.17
PTPRA-204ENST00000380393 LIPT2A6NK58 231 aa7.75□□□□□ -1.17
PTPRA-204ENST00000380393 LYRM4Q9HD34 91 aa7.75□□□□□ -1.17
PTPRA-204ENST00000380393 KLRF1Q9NZS2 232 aa7.75□□□□□ -1.17
PTPRA-204ENST00000380393 EXPH5Q8NEV8 1989 aa7.75□□□□□ -1.17
PTPRA-204ENST00000380393 SMAD7O15105 426 aaKnown RBP7.75□□□□□ -1.17
PTPRA-204ENST00000380393 CD38P28907 300 aa7.75□□□□□ -1.17
PTPRA-204ENST00000380393 KISS1Q15726 138 aa7.75□□□□□ -1.17
PTPRA-204ENST00000380393 H1FNTQ75WM6 255 aaPredicted RBP7.75□□□□□ -1.17
PTPRA-204ENST00000380393 CACNA1HO95180 2353 aa7.75□□□□□ -1.17
PTPRA-204ENST00000380393 CXorf51AA0A1B0GTR3 108 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 TGFBR3LH3BV60 316 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 FASLGP48023 281 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 RBM11P57052 281 aaKnown RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 RSPO4Q2I0M5 234 aaPredicted RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 TEPPQ6URK8 271 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 TEX45Q8NA69 505 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 OR1L1Q8NH94 360 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 FREM2Q5SZK8 3169 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 SLC25A5P05141 298 aaKnown RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 GP1BBP13224 206 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 TRIP6Q15654 476 aaKnown RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 WIPI1Q5MNZ9 446 aaPredicted RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 MMABQ96EY8 250 aaPredicted RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 URB1-AS1Q96HZ7 61 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 IGKV1D-43A0A0B4J1Z2 117 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 RHODO00212 210 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 IFITM1P13164 125 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 CSN1S1P47710 185 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 FXYD2P54710 66 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 MFAP2P55001 183 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 PRSS12P56730 875 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 GAPTQ8N292 157 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 FAM131CQ96AQ9 280 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 TMEM126AQ9H061 195 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 LIN7CQ9NUP9 197 aaKnown RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 NHP2Q9NX24 153 aaKnown RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 CACNG5Q9UF02 275 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 ATP23Q9Y6H3 246 aa7.74□□□□□ -1.17
PTPRA-204ENST00000380393 DIDO1Q9BTC0 2240 aaKnown RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 EP300Q09472 2414 aaPredicted RBP7.74□□□□□ -1.17
PTPRA-204ENST00000380393 TEX50A0A1B0GTY4 177 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 PRSS38A1L453 326 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 TMEM8BA6NDV4 472 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 THBDP07204 575 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 TFF3Q07654 80 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 IBA57Q5T440 356 aaKnown RBP7.73□□□□□ -1.17
PTPRA-204ENST00000380393 LCNL1Q6ZST4 164 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 DNAJC30Q96LL9 226 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 SPANXA1Q9NS26 97 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 H3BML4 177 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 DUX1O43812 170 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 CDAP32320 146 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 MRPL23Q16540 153 aaKnown RBP7.73□□□□□ -1.17
PTPRA-204ENST00000380393 DTX1Q86Y01 620 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 BCL6BQ8N143 479 aaPredicted RBP7.73□□□□□ -1.17
PTPRA-204ENST00000380393 OR1L8Q8NGR8 309 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 TM4SF19Q96DZ7 209 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 DUX5Q96PT3 197 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 TXNDC17Q9BRA2 123 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 TXNIPQ9H3M7 391 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 LOC107984640A0A0U1RRK4 108 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 IZUMO1RA6ND01 250 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 E9PLD3 99 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 F5H768 121 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 CAMPP49913 170 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 LINC01545Q5VT33 79 aa7.73□□□□□ -1.17
PTPRA-204ENST00000380393 HLA-DQA1Q5Y7H0 255 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms