RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 GNB1P62873 340 aa6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 EFNB3Q15768 340 aa6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 BSXQ3C1V8 233 aa6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 SPNS3Q6ZMD2 512 aa6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 SSX8Q7RTT4 187 aa6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 C16orf82Q7Z2V1 217 aa6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 NECAP1Q8NC96 275 aa6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 NEIL1Q96FI4 390 aaPredicted RBP6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 AURKAIP1Q9NWT8 199 aaPredicted RBP6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 BET1LQ9NYM9 111 aa6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 METTL1Q9UBP6 276 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 ZNF257Q9Y2Q1 563 aa6.46□□□□□ -1.38
PDLIM5-204ENST00000380176 CHD8Q9HCK8 2581 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 AP4M1O00189 453 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 STAG3L2P0CL84 134 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 GATA2P23769 480 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 CA7P43166 264 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 ST6GALNAC6Q969X2 333 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 FAM210BQ96KR6 192 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 NABP2Q9BQ15 211 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 KAAG1Q9UBP8 84 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 CGB1A6NKQ9 187 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 CCL21O00585 134 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 APOA2P02652 100 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 LINC00869P0C866 280 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 RNASE2P10153 161 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 NHLH1Q02575 133 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 CLEC12BQ2HXU8 276 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 TMEM155Q4W5P6 130 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 C10orf55Q5SWW7 151 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 OSR1Q8TAX0 266 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 ELOVL1Q9BW60 279 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 NIT2Q9NQR4 276 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 RPH3ALQ9UNE2 315 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 NCOR2Q9Y618 2525 aa6.45□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST1H2BKO60814 126 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 NDUFB4O95168 129 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST1H2BJP06899 126 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 IGHV1-8P0DP01 117 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST1H2BOP23527 126 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST1H2BBP33778 126 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST1H2BDP58876 126 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST1H2BCP62807 126 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 PRR20EP86478 221 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 PRR20CP86479 221 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 PRR20DP86480 221 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 PRR20BP86481 221 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 PRR20AP86496 221 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST2H2BEQ16778 126 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 TMEM249Q2WGJ8 235 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 SAMD5Q5TGI4 173 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 ZNF596Q8TC21 504 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST1H2BHQ93079 126 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 FLYWCH2Q96CP2 140 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST1H2BNQ99877 126 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 HIST1H2BMQ99879 126 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 NDUFA4L2Q9NRX3 87 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 IGHV3-72A0A0B4J1Y9 119 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 ACTL6BO94805 426 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 IGLV2-23P01705 113 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 RPL29P47914 159 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 RPL8P62917 257 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 TNP2Q05952 138 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 GAGE1Q13065 139 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 GAMTQ14353 236 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 SLC16A13Q7RTY0 426 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 MUC15Q8N387 334 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 ZNF114Q8NC26 417 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 WFDC12Q8WWY7 111 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 C14orf144Q96I85 54 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 PFDN5Q99471 154 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 TPSG1Q9NRR2 321 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 DOK5Q9P104 306 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 YTHDF2Q9Y5A9 579 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 IFITM10A6NMD0 228 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 LY6HO94772 140 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 PFN1P07737 140 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 CDKN1BP46527 198 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 NDUFA6P56556 154 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 ADORA2A-AS1P86434 159 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 C2orf83Q53S99 150 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 LINC00311Q8N616 119 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 OR4C13Q8NGP0 309 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 OR5B3Q8NH48 314 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 OR9G1Q8NH87 305 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 FRZBQ92765 325 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 TMEM186Q96B77 213 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 COMMD5Q9GZQ3 224 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 CTDSP1Q9GZU7 261 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 SLC45A2Q9UMX9 530 aa6.44□□□□□ -1.38
PDLIM5-204ENST00000380176 ASH1LQ9NR48 2969 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 TRBV20OR9-2A0A075B6H5 130 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 TRBV24-1A0A075B6N3 115 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 CXorf1O96002 111 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 WT1-ASQ06250 92 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 MRGPRG-AS1Q2M3A8 158 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 ZNF841Q6ZN19 808 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 MIR17HGQ75NE6 70 aa6.43□□□□□ -1.38
PDLIM5-204ENST00000380176 OR2T6Q8NHC8 308 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms