RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 GATA2P23769 480 aaPredicted RBP11.38□□□□□ -0.59
SNCAIP-203ENST00000379538 KLF3P57682 345 aaPredicted RBP11.38□□□□□ -0.59
SNCAIP-203ENST00000379538 SLAQ13239 276 aa11.38□□□□□ -0.59
SNCAIP-203ENST00000379538 SPATA12Q7Z6I5 190 aa11.38□□□□□ -0.59
SNCAIP-203ENST00000379538 ORAOV1Q8WV07 137 aa11.38□□□□□ -0.59
SNCAIP-203ENST00000379538 GALMQ96C23 342 aa11.38□□□□□ -0.59
SNCAIP-203ENST00000379538 MBNL3Q9NUK0 354 aaKnown RBP11.38□□□□□ -0.59
SNCAIP-203ENST00000379538 ANKHD1Q8IWZ3 2542 aaKnown RBP11.38□□□□□ -0.59
SNCAIP-203ENST00000379538 CBY3A6NI87 242 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 CXorf1O96002 111 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 GPR6P46095 362 aaPredicted RBP11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 PRRX1P54821 245 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 EIF4EBP1Q13541 118 aaPredicted RBP11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 EFNB3Q15768 340 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 SAPCD1Q5SSQ6 148 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 MIR17HGQ75NE6 70 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 MOB3BQ86TA1 216 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 Q8TCH9 128 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 A0A1W2PN81 502 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 RNF212BA8MTL3 300 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 FCGR3BO75015 233 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 PROP1O75360 226 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 GABRA2P47869 451 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 CDSNQ15517 529 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 PMCHL1Q16048 86 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 NEUROG1Q92886 237 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 LINC00479Q96M42 142 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 CENPEQ02224 2701 aa11.37□□□□□ -0.59
SNCAIP-203ENST00000379538 PIGBOS1A0A0B4J2F0 54 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 SH2D7A6NKC9 451 aaPredicted RBP11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 J3QT63 122 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 ABCA1O95477 2261 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 OR10J4P0C629 311 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 MGST1P10620 155 aaKnown RBP11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 IGLL1P15814 213 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 CD24P25063 80 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 ARR3P36575 388 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 TNXAQ16473 311 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 UTF1Q5T230 341 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 OR4C5Q8NGB2 326 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 RAB1CQ92928 201 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 CDC42EP3Q9UKI2 254 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 CECR9P0C854 216 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 NRN1LQ496H8 165 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 FBLN7Q53RD9 439 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 EBLN2Q6P2I7 272 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 VHLLQ6RSH7 139 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 LINC00596Q86U02 117 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 ZNF738Q8NE65 137 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 FAM216AQ8WUB2 273 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 SSBP4Q9BWG4 385 aaPredicted RBP11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 GNB1LQ9BYB4 327 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 GAL3ST2Q9H3Q3 398 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 GCM1Q9NP62 436 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 ZNF462Q96JM2 2506 aa11.36□□□□□ -0.59
SNCAIP-203ENST00000379538 IGHV2OR16-5A0A0B4J2B6 119 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 OR5B21A6NL26 309 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 A8MXE2 369 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 RAB29O14966 203 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 GNG4P50150 75 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 FABP6P51161 128 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 CATR1Q13166 79 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 BHLHA15Q7RTS1 189 aaPredicted RBP11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 STPG3Q8N7X2 389 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 MCRIP2Q9BUT9 160 aaKnown RBP11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 TECRQ9NZ01 308 aaKnown RBP11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 KCNIP1Q9NZI2 227 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 CSMD1Q96PZ7 3565 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 HELTA6NFD8 242 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 HAND1O96004 215 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 HOXC12P31275 282 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 MPV17P39210 176 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 OPRK1P41145 380 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 CX3CL1P78423 397 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 PSG5Q15238 335 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 VAMP3Q15836 100 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 OR4F17Q8NGA8 305 aa11.35□□□□□ -0.59
SNCAIP-203ENST00000379538 GRNP28799 593 aaKnown RBP11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 CDKN1BP46527 198 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 PRAMEF5Q5TYX0 476 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 PRAMEF6Q5VXH4 476 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 MOB1BQ7L9L4 216 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 ZNF439Q8NDP4 499 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 OR13A1Q8NGR1 328 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 NINJ1Q92982 152 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 BORCS7Q96B45 105 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 COQ2Q96H96 371 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 CLEC5AQ9NY25 188 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 USP9XQ93008 2570 aaPredicted RBP11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 M0R1B8 84 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 IGFBP2P18065 325 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 ERVK11-1P61568 191 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 MSMPQ1L6U9 139 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 RPL39P5Q59GN2 51 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 LDLRAD2Q5SZI1 272 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 SLC25A40Q8TBP6 338 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 BET1LQ9NYM9 111 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 MPC1Q9Y5U8 109 aa11.34□□□□□ -0.59
SNCAIP-203ENST00000379538 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms