RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CYTL1Q9NRR1 136 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 MTCH1Q9NZJ7 389 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 PCNX3Q9H6A9 2034 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 CHD9Q3L8U1 2897 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 IGHV2-70DA0A0C4DH43 119 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 IGKV1-9A0A0C4DH69 117 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 RAB4AP20338 218 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 SYNJ2BPP57105 145 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 RND3P61587 244 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 VAX1Q5SQQ9 334 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 OR4C5Q8NGB2 326 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 OR5C1Q8NGR4 320 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 NABP1Q96AH0 204 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 HIST1H2BLQ99880 126 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 NDUFAF3Q9BU61 184 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 DNAJC4Q9NNZ3 241 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 ANXA10Q9UJ72 324 aa5.41□□□□□ -1.54
NEDD9-202ENST00000379446 FOXA2Q9Y261 457 aaPredicted RBP5.41□□□□□ -1.54
NEDD9-202ENST00000379446 IGKV1D-8A0A087WSZ0 117 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 E5RGE8 158 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 H0Y8G0 127 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 TSPOP30536 169 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 RHOGP84095 191 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 IL13RA2Q14627 380 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 LCN12Q6JVE5 192 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 HIST3H2BBQ8N257 126 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.4□□□□□ -1.54
NEDD9-202ENST00000379446 IL17DQ8TAD2 202 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 PSENENQ9NZ42 101 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 VPREB3Q9UKI3 123 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 UFC1Q9Y3C8 167 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 TSSC4Q9Y5U2 329 aaPredicted RBP5.4□□□□□ -1.54
NEDD9-202ENST00000379446 V9GYS6 101 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 XIRP2A4UGR9 3374 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 DNAH14Q0VDD8 3507 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 ELOA3CA0A087WX78 387 aaPredicted RBP5.4□□□□□ -1.54
NEDD9-202ENST00000379446 IGHV2-5P01817 119 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 FCGR3AP08637 254 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 ZFAND6Q6FIF0 208 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 PRSS57Q6UWY2 283 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 HEPN1Q6WQI6 88 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 RTBDNQ9BSG5 229 aaPredicted RBP5.4□□□□□ -1.54
NEDD9-202ENST00000379446 C1QTNF5Q9BXJ0 243 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 SIGLEC9Q9Y336 463 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 OR51B2Q9Y5P1 312 aa5.4□□□□□ -1.54
NEDD9-202ENST00000379446 NUDT3O95989 172 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 MELTFP08582 738 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 TREML4Q6UXN2 200 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 OR5P3Q8WZ94 311 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 VAMP8Q9BV40 100 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 KLK5Q9Y337 293 aaPredicted RBP5.4□□□□□ -1.55
NEDD9-202ENST00000379446 A0A0U1RQV5 110 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 SERTM2A0A1B0GWG4 89 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 ANOS1P23352 680 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 ATP6V0CP27449 155 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 HOXD3P31249 432 aaPredicted RBP5.4□□□□□ -1.55
NEDD9-202ENST00000379446 CFHR2P36980 270 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 FAM3BP58499 235 aaPredicted RBP5.4□□□□□ -1.55
NEDD9-202ENST00000379446 SAMD13Q5VXD3 122 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 AMMECR1LQ6DCA0 310 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 BTNL8Q6UX41 500 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 POC1AQ8NBT0 407 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 MRGPRFQ96AM1 343 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 SMIM8Q96KF7 97 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 ZNF581Q9P0T4 197 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 PCDH15Q96QU1 1955 aa5.4□□□□□ -1.55
NEDD9-202ENST00000379446 DENND4AQ7Z401 1863 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 SRSF10O75494 262 aaKnown RBP5.39□□□□□ -1.55
NEDD9-202ENST00000379446 HIST1H1EP10412 219 aaKnown RBP5.39□□□□□ -1.55
NEDD9-202ENST00000379446 FCGR2BP31994 310 aaPredicted RBP5.39□□□□□ -1.55
NEDD9-202ENST00000379446 ENDOGQ14249 297 aaKnown RBP5.39□□□□□ -1.55
NEDD9-202ENST00000379446 ZNF266Q14584 549 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 MINOS1Q5TGZ0 78 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 C16orf82Q7Z2V1 217 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 SNHG12Q9BXW3 62 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 NAA60Q9H7X0 242 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 MINOS1-NBL1R4GNA1 71 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 GRIFINA4D1Z8 144 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 CD5P06127 495 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 SLC25A6P12236 298 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 FOLR2P14207 255 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 PMCHP20382 165 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 RBM11P57052 281 aaKnown RBP5.39□□□□□ -1.55
NEDD9-202ENST00000379446 SUPT4H1P63272 117 aaKnown RBP5.39□□□□□ -1.55
NEDD9-202ENST00000379446 C9orf66Q5T8R8 295 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 ASCL4Q6XD76 172 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 FGFBP3Q8TAT2 258 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 UBE2E2Q96LR5 201 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 MRPL13Q9BYD1 178 aaKnown RBP5.39□□□□□ -1.55
NEDD9-202ENST00000379446 PLEKHA2Q9HB19 425 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 CCL28Q9NRJ3 127 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 CACNG5Q9UF02 275 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 DOCK11Q5JSL3 2073 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 PTPRSQ13332 1948 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 KBTBD11-OT1A0A1B0GTJ5 212 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 M0R1W7 72 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 CRLF1O75462 422 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 CTSDP07339 412 aaPredicted RBP5.39□□□□□ -1.55
NEDD9-202ENST00000379446 G6PCP35575 357 aa5.39□□□□□ -1.55
NEDD9-202ENST00000379446 CMC4P56277 68 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms