RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 SNRNP70P08621 437 aaKnown RBP12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 EBI3Q14213 229 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 CLRN3Q8NCR9 226 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 OR2T10Q8NGZ9 312 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 SRSF12Q8WXF0 261 aaKnown RBP12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 NRGNQ92686 78 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 A1L4Q6 167 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 DNASE2O00115 360 aaPredicted RBP12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 IFNA1P01562 189 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 LINC00869P0C866 280 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 PAX8Q06710 450 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 TMEM249Q2WGJ8 235 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 SOHLH1Q5JUK2 328 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 Q8N6K4 173 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 OR2T6Q8NHC8 308 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 MALSU1Q96EH3 234 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 PERPQ96FX8 193 aa12.28□□□□□ -0.44
RAB3IP-204ENST00000378815 ASH1LQ9NR48 2969 aaKnown RBP12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 MED13LQ71F56 2210 aa12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 FAM74A7A6NL05 159 aa12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 FBP1P09467 338 aa12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 FAM74A3Q4VXF1 159 aa12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 RBMS3Q6XE24 437 aaKnown RBP12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 SUN5Q8TC36 379 aa12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 SLC35E1Q96K37 410 aa12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 SRSF8Q9BRL6 282 aaKnown RBP12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 TMPRSS5Q9H3S3 457 aa12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 VAX2Q9UIW0 290 aa12.27□□□□□ -0.44
RAB3IP-204ENST00000378815 A0A1W2PPV4 95 aa12.27□□□□□ -0.45
RAB3IP-204ENST00000378815 MFAP2P55001 183 aa12.27□□□□□ -0.45
RAB3IP-204ENST00000378815 HES1Q14469 280 aa12.27□□□□□ -0.45
RAB3IP-204ENST00000378815 CYB561D1Q8N8Q1 229 aa12.27□□□□□ -0.45
RAB3IP-204ENST00000378815 OR10J1P30954 320 aa12.26□□□□□ -0.45
RAB3IP-204ENST00000378815 OR1P1Q8NH06 330 aa12.26□□□□□ -0.45
RAB3IP-204ENST00000378815 PLXNB1O43157 2135 aa12.26□□□□□ -0.45
RAB3IP-204ENST00000378815 APELAP0DMC3 54 aa12.26□□□□□ -0.45
RAB3IP-204ENST00000378815 SAA4P35542 130 aa12.26□□□□□ -0.45
RAB3IP-204ENST00000378815 C5orf64Q2M2E5 130 aa12.26□□□□□ -0.45
RAB3IP-204ENST00000378815 SLC35E3Q7Z769 313 aa12.26□□□□□ -0.45
RAB3IP-204ENST00000378815 ACY3Q96HD9 319 aa12.26□□□□□ -0.45
RAB3IP-204ENST00000378815 CRYGCP07315 174 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 DSCR9P59020 149 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 MANBALQ9NQG1 85 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 TMA7Q9Y2S6 64 aaKnown RBP12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 F11RQ9Y624 299 aaKnown RBP12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 NAV3Q8IVL0 2385 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 CENPVL3A0A0U1RRI6 287 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 NPFFO15130 113 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 NUPL2O15504 423 aaKnown RBP12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 CNIH1O95406 144 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 STAG3L2P0CL84 134 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 STAG3L3P0CL85 134 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 TAGLN2P37802 199 aaKnown RBP12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 C19orf35Q6ZS72 473 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 SEPSECSQ9HD40 501 aaKnown RBP12.25□□□□□ -0.45
RAB3IP-204ENST00000378815 WNK2Q9Y3S1 2297 aa12.24□□□□□ -0.45
RAB3IP-204ENST00000378815 PSMB3P49720 205 aa12.24□□□□□ -0.45
RAB3IP-204ENST00000378815 RHOBP62745 196 aa12.24□□□□□ -0.45
RAB3IP-204ENST00000378815 ETFRF1Q6IPR1 90 aa12.24□□□□□ -0.45
RAB3IP-204ENST00000378815 ABHD5Q8WTS1 349 aa12.24□□□□□ -0.45
RAB3IP-204ENST00000378815 NPIPB3Q92617 1050 aa12.24□□□□□ -0.45
RAB3IP-204ENST00000378815 MISP3Q96FF7 219 aa12.24□□□□□ -0.45
RAB3IP-204ENST00000378815 MRPL36Q9P0J6 103 aaKnown RBP12.24□□□□□ -0.45
RAB3IP-204ENST00000378815 DMRT1Q9Y5R6 373 aa12.24□□□□□ -0.45
RAB3IP-204ENST00000378815 CORTO00230 105 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 CD81P60033 236 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 MEF2BQ02080 365 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 FXYD3Q14802 87 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 THAP8Q8NA92 274 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 IGKV1D-37A0A075B6S9 117 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 FAM106CPP0CH98 169 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 TMEM11P17152 192 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 GATA2P23769 480 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 CEBPGP53567 150 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 AWAT1Q58HT5 328 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 FAM90A2PQ658T7 463 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 TMEM88Q6PEY1 159 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 CYP2G1PQ6ZSU1 146 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 IQCF2Q8IXL9 164 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 GATAD1Q8WUU5 269 aa12.23□□□□□ -0.45
RAB3IP-204ENST00000378815 IGHV3-48P01763 117 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 ARL14EPLP0DKL9 152 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 CBLN2Q8IUK8 224 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 SPG11Q96JI7 2443 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 ABCA2Q9BZC7 2435 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 NDUFS6O75380 124 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 CXorf1O96002 111 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 BRS3P32247 399 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 RND2P52198 227 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 SPATA31B1PQ5VZV4 182 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 RUSC1-AS1Q66K80 236 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 ZNF562Q6V9R5 426 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 SLC25A33Q9BSK2 321 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 C19orf24Q9BVV8 132 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 PUS1Q9Y606 427 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 LRRK2Q5S007 2527 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 FAM208BQ5VWN6 2430 aa12.22□□□□□ -0.45
RAB3IP-204ENST00000378815 NCBP2LA6PVI3 153 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms