RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 TMEM140Q9NV12 185 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 CABIN1Q9Y6J0 2220 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 SPINT2O43291 252 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 MT-CO3P00414 261 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 C8orf88P0DMB2 117 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 COX8AP10176 69 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 DUSP3P51452 185 aaPredicted RBP11.22□□□□□ -0.61
KIF3A-201ENST00000378735 FOXA2Q9Y261 457 aaPredicted RBP11.22□□□□□ -0.61
KIF3A-201ENST00000378735 SAP30O75446 220 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 FOXG1P55316 489 aaPredicted RBP11.22□□□□□ -0.61
KIF3A-201ENST00000378735 ATP5IP56385 69 aaPredicted RBP11.22□□□□□ -0.61
KIF3A-201ENST00000378735 RIPPLY3P57055 190 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 OR1B1Q8NGR6 318 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 H1FXQ92522 213 aaKnown RBP11.22□□□□□ -0.61
KIF3A-201ENST00000378735 ENY2Q9NPA8 101 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 TP73-AS1Q9UF72 201 aa11.22□□□□□ -0.61
KIF3A-201ENST00000378735 SDK2Q58EX2 2172 aa11.21□□□□□ -0.61
KIF3A-201ENST00000378735 H3BRM9 83 aa11.21□□□□□ -0.61
KIF3A-201ENST00000378735 LAMTOR5O43504 91 aa11.21□□□□□ -0.61
KIF3A-201ENST00000378735 GPR6P46095 362 aaPredicted RBP11.21□□□□□ -0.61
KIF3A-201ENST00000378735 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
KIF3A-201ENST00000378735 HBBP68871 147 aa11.21□□□□□ -0.61
KIF3A-201ENST00000378735 RBPJQ06330 500 aa11.21□□□□□ -0.61
KIF3A-201ENST00000378735 HSPB8Q9UJY1 196 aa11.21□□□□□ -0.61
KIF3A-201ENST00000378735 OR51B2Q9Y5P1 312 aa11.21□□□□□ -0.61
KIF3A-201ENST00000378735 HIGD1CA8MV81 97 aa11.21□□□□□ -0.62
KIF3A-201ENST00000378735 AHRRA9YTQ3 701 aa11.21□□□□□ -0.62
KIF3A-201ENST00000378735 PROP1O75360 226 aa11.21□□□□□ -0.62
KIF3A-201ENST00000378735 SMIM17P0DL12 118 aa11.21□□□□□ -0.62
KIF3A-201ENST00000378735 SCGB1A1P11684 91 aa11.21□□□□□ -0.62
KIF3A-201ENST00000378735 NEGR1Q7Z3B1 354 aa11.21□□□□□ -0.62
KIF3A-201ENST00000378735 SAP25Q8TEE9 199 aa11.21□□□□□ -0.62
KIF3A-201ENST00000378735 DPF1Q92782 380 aa11.21□□□□□ -0.62
KIF3A-201ENST00000378735 SLC25A33Q9BSK2 321 aa11.21□□□□□ -0.62
KIF3A-201ENST00000378735 C9orf118A6NHY6 69 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 TUSC5Q8IXB3 177 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 FREM1Q5H8C1 2179 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 CEBPDP49716 269 aaPredicted RBP11.2□□□□□ -0.62
KIF3A-201ENST00000378735 SSBP4Q9BWG4 385 aaPredicted RBP11.2□□□□□ -0.62
KIF3A-201ENST00000378735 A0A087X0K7 114 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 TRAV3A0A0B4J244 114 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 A0A1W2PQM1 296 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 FAM231BA6NCW3 169 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 C15orf65H3BRN8 121 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 KLF7O75840 302 aaPredicted RBP11.2□□□□□ -0.62
KIF3A-201ENST00000378735 GDF1P27539 372 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 TMEM97Q5BJF2 176 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 LINC01545Q5VT33 79 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 SSX8Q7RTT4 187 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 BPIFA4PQ86YQ2 179 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 NANOS1Q8WY41 292 aaKnown RBP11.2□□□□□ -0.62
KIF3A-201ENST00000378735 AP1S3Q96PC3 154 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 S1PR3Q99500 378 aa11.2□□□□□ -0.62
KIF3A-201ENST00000378735 AMMECR1Q9Y4X0 333 aaPredicted RBP11.2□□□□□ -0.62
KIF3A-201ENST00000378735 A6NDN8 102 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 K7EP34 96 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 CT83Q5H943 113 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 C2orf91Q6ZV80 131 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 OR13A1Q8NGR1 328 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 HTR1DP28221 377 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 CAMPP49913 170 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 IL11RAQ14626 422 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 NDFIP1Q9BT67 221 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 C7orf69Q9H7B7 122 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 JPT1Q9UK76 154 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 IGHV3-43A0A0B4J1X8 118 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 IGHV3-43DP0DP04 118 aa11.19□□□□□ -0.62
KIF3A-201ENST00000378735 LOC102724200A0A096LPH7 203 aaPredicted RBP11.18□□□□□ -0.62
KIF3A-201ENST00000378735 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 C1orf210Q8IVY1 113 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 VKORC1L1Q8N0U8 176 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 C5orf17Q8NAS9 161 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 OR5A1Q8NGJ0 315 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 LY6G6EA0A0G2JKS1 128 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 TMEM238LA0A1B0GVL6 79 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 SH2D7A6NKC9 451 aaPredicted RBP11.18□□□□□ -0.62
KIF3A-201ENST00000378735 DEFB108AA8MXU0 73 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 IQCF6A8MYZ5 107 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 PEX7O00628 323 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 TBC1D28Q2M2D7 210 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 C1orf185Q5T7R7 199 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 ACP7Q6ZNF0 438 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 FAM90A1Q86YD7 464 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 U3KQA8 63 aa11.18□□□□□ -0.62
KIF3A-201ENST00000378735 COL8A2P25067 703 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 Q6ZR03 302 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 TMEM251Q8N6I4 163 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 DDB2Q92466 427 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 FAM167A-AS1Q96KT0 104 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 BMI1P35226 326 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 ZNF841Q6ZN19 808 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 TMEM186Q96B77 213 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 VWC2LB2RUY7 222 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 CER1O95813 267 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 GRPP07492 148 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 UBE2L3P68036 154 aaKnown RBP11.17□□□□□ -0.62
KIF3A-201ENST00000378735 MRPL49Q13405 166 aaKnown RBP11.17□□□□□ -0.62
KIF3A-201ENST00000378735 GUSBP11Q6P575 273 aa11.17□□□□□ -0.62
KIF3A-201ENST00000378735 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms