RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 SPANXN2Q5MJ10 180 aa12.84□□□□□ -0.35
RER1-202ENST00000378512 PLET1Q6UQ28 207 aa12.84□□□□□ -0.35
RER1-202ENST00000378512 SGPP2Q8IWX5 399 aa12.84□□□□□ -0.35
RER1-202ENST00000378512 OR52E5Q8NH55 327 aa12.84□□□□□ -0.35
RER1-202ENST00000378512 MCUBQ9NWR8 336 aa12.84□□□□□ -0.35
RER1-202ENST00000378512 TECRQ9NZ01 308 aaKnown RBP12.84□□□□□ -0.35
RER1-202ENST00000378512 ZNF785A8K8V0 405 aa12.83□□□□□ -0.36
RER1-202ENST00000378512 FRMD6-AS1P0C7T7 363 aa12.83□□□□□ -0.36
RER1-202ENST00000378512 BSXQ3C1V8 233 aa12.83□□□□□ -0.36
RER1-202ENST00000378512 CD300EQ496F6 205 aaPredicted RBP12.83□□□□□ -0.36
RER1-202ENST00000378512 TXN2Q99757 166 aa12.83□□□□□ -0.36
RER1-202ENST00000378512 CHRDL1Q9BU40 450 aa12.83□□□□□ -0.36
RER1-202ENST00000378512 C19orf73Q9NVV2 129 aa12.83□□□□□ -0.36
RER1-202ENST00000378512 OR2T8A6NH00 312 aa12.82□□□□□ -0.36
RER1-202ENST00000378512 CTSGP08311 255 aa12.82□□□□□ -0.36
RER1-202ENST00000378512 TMEM268Q5VZI3 342 aa12.82□□□□□ -0.36
RER1-202ENST00000378512 TMEM190Q8WZ59 177 aa12.82□□□□□ -0.36
RER1-202ENST00000378512 GPR146Q96CH1 333 aa12.82□□□□□ -0.36
RER1-202ENST00000378512 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.82□□□□□ -0.36
RER1-202ENST00000378512 KCNIP3Q9Y2W7 256 aa12.82□□□□□ -0.36
RER1-202ENST00000378512 IGHV3-21A0A0B4J1V1 117 aa12.81□□□□□ -0.36
RER1-202ENST00000378512 NDUFA4O00483 81 aa12.81□□□□□ -0.36
RER1-202ENST00000378512 IFNA17P01571 189 aa12.81□□□□□ -0.36
RER1-202ENST00000378512 RNASE2P10153 161 aaKnown RBP12.81□□□□□ -0.36
RER1-202ENST00000378512 SPCS3P61009 180 aa12.81□□□□□ -0.36
RER1-202ENST00000378512 SPINK9Q5DT21 86 aa12.81□□□□□ -0.36
RER1-202ENST00000378512 SLC35G3Q8N808 338 aa12.81□□□□□ -0.36
RER1-202ENST00000378512 CACNG8Q8WXS5 425 aa12.81□□□□□ -0.36
RER1-202ENST00000378512 MARC2Q969Z3 335 aa12.81□□□□□ -0.36
RER1-202ENST00000378512 RCHY1Q96PM5 261 aa12.81□□□□□ -0.36
RER1-202ENST00000378512 SDHCQ99643 169 aaPredicted RBP12.81□□□□□ -0.36
RER1-202ENST00000378512 SLC25A21Q9BQT8 299 aaPredicted RBP12.81□□□□□ -0.36
RER1-202ENST00000378512 PALMDQ9NP74 551 aa12.81□□□□□ -0.36
RER1-202ENST00000378512 GAR1Q9NY12 217 aaKnown RBP12.81□□□□□ -0.36
RER1-202ENST00000378512 ZNF320A2RRD8 509 aa12.8□□□□□ -0.36
RER1-202ENST00000378512 MT-CO2P00403 227 aa12.8□□□□□ -0.36
RER1-202ENST00000378512 IGHV4-30-4P0DP06 118 aa12.8□□□□□ -0.36
RER1-202ENST00000378512 BAK1Q16611 211 aa12.8□□□□□ -0.36
RER1-202ENST00000378512 TM4SF20Q53R12 229 aa12.8□□□□□ -0.36
RER1-202ENST00000378512 NMSQ5H8A3 153 aa12.8□□□□□ -0.36
RER1-202ENST00000378512 PDCD10Q9BUL8 212 aa12.8□□□□□ -0.36
RER1-202ENST00000378512 MRPL27Q9P0M9 148 aaKnown RBP12.8□□□□□ -0.36
RER1-202ENST00000378512 MLXQ9UH92 298 aa12.8□□□□□ -0.36
RER1-202ENST00000378512 UFC1Q9Y3C8 167 aa12.8□□□□□ -0.36
RER1-202ENST00000378512 A0A0B4J2A0 478 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 MFAP4P55083 255 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 TMEM128Q5BJH2 165 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 UXS1Q8NBZ7 420 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 RNASE11Q8TAA1 199 aaKnown RBP12.79□□□□□ -0.36
RER1-202ENST00000378512 DYNLRB2Q8TF09 96 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 MISP3Q96FF7 219 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 CACNG5Q9UF02 275 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 SHPKQ9UHJ6 478 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 RYR2Q92736 4967 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 IGHV3-35A0A0C4DH35 117 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 K7EMT4 169 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 CORTO00230 105 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 AKR1C4P17516 323 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 SNCAP37840 140 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 LRTM2Q8N967 370 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 OR10C1Q96KK4 312 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 PRR13Q9NZ81 148 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 CACFD1Q9UGQ2 172 aa12.79□□□□□ -0.36
RER1-202ENST00000378512 SUB1P53999 127 aaKnown RBP eCLIP12.78□□□□□ -0.365e-8■□□□□ 8.7
RER1-202ENST00000378512 SRPXP78539 464 aa12.78□□□□□ -0.36
RER1-202ENST00000378512 Q56UQ5 140 aa12.78□□□□□ -0.36
RER1-202ENST00000378512 LYZL2Q7Z4W2 148 aa12.78□□□□□ -0.36
RER1-202ENST00000378512 GTSCR1Q86UQ5 136 aa12.78□□□□□ -0.36
RER1-202ENST00000378512 TMEM61Q8N0U2 210 aa12.78□□□□□ -0.36
RER1-202ENST00000378512 DAZ1Q9NQZ3 744 aaKnown RBP12.78□□□□□ -0.36
RER1-202ENST00000378512 SACSQ9NZJ4 4579 aa12.77□□□□□ -0.36
RER1-202ENST00000378512 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.37
RER1-202ENST00000378512 DUXBA0A1W2PPF3 345 aa12.77□□□□□ -0.37
RER1-202ENST00000378512 C15orf62A8K5M9 175 aa12.77□□□□□ -0.37
RER1-202ENST00000378512 SULT1A3P0DMM9 295 aa12.77□□□□□ -0.37
RER1-202ENST00000378512 SULT1A4P0DMN0 295 aa12.77□□□□□ -0.37
RER1-202ENST00000378512 ANXA3P12429 323 aa12.77□□□□□ -0.37
RER1-202ENST00000378512 HOXA1P49639 335 aaPredicted RBP12.77□□□□□ -0.37
RER1-202ENST00000378512 ZNF57Q68EA5 555 aaPredicted RBP12.77□□□□□ -0.37
RER1-202ENST00000378512 LINC00322Q6ZN03 302 aaPredicted RBP12.77□□□□□ -0.37
RER1-202ENST00000378512 LGI3Q8N145 548 aa12.77□□□□□ -0.37
RER1-202ENST00000378512 UBAC2Q8NBM4 344 aa12.77□□□□□ -0.37
RER1-202ENST00000378512 WDR89Q96FK6 387 aaPredicted RBP12.77□□□□□ -0.37
RER1-202ENST00000378512 FNDC4Q9H6D8 234 aaPredicted RBP12.77□□□□□ -0.37
RER1-202ENST00000378512 PIGBOS1A0A0B4J2F0 54 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 NAP1L6A6NFF2 107 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 C3orf84H3BNL1 204 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 NUPL2O15504 423 aaKnown RBP12.76□□□□□ -0.37
RER1-202ENST00000378512 HTR2BP41595 481 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 CCR6P51684 374 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 RELQ04864 619 aaPredicted RBP12.76□□□□□ -0.37
RER1-202ENST00000378512 RBMS2Q15434 407 aaKnown RBP12.76□□□□□ -0.37
RER1-202ENST00000378512 C2orf83Q53S99 150 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 CASC10Q5T4H9 136 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 BTNL8Q6UX41 500 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 MUC7Q8TAX7 377 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 PINX1Q96BK5 328 aaKnown RBP12.76□□□□□ -0.37
RER1-202ENST00000378512 TM2D3Q9BRN9 247 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 HSPB7Q9UBY9 170 aa12.76□□□□□ -0.37
RER1-202ENST00000378512 CSMD3Q7Z407 3707 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms