RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TRAV8-4A0A0B4J246 113 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 PSG2P11465 335 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 PSG4Q00888 419 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 ARL16Q0P5N6 197 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 ZNF726P1Q15940 193 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 AMTNQ6UX39 209 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 CENPVQ7Z7K6 275 aaPredicted RBP9.87□□□□□ -0.83
NPHP4-202ENST00000378161 UBALD2Q8IYN6 164 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 HEATR5BQ9P2D3 2071 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 TNFRSF6BO95407 300 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 P01737 135 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 EGR4Q05215 589 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 ZNF355PQ9NSJ1 428 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 POLDIP2Q9Y2S7 368 aa9.87□□□□□ -0.83
NPHP4-202ENST00000378161 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 PDCD1Q15116 288 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 DUX4L9Q6RFH8 374 aaPredicted RBP9.86□□□□□ -0.83
NPHP4-202ENST00000378161 SCRT2Q9NQ03 307 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 GNG12Q9UBI6 72 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 VPREB3Q9UKI3 123 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 SIT1Q9Y3P8 196 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 GNG5P63218 68 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 FOXI1Q12951 378 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 TMEM211Q6ICI0 200 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 FAM159AQ6UWV7 190 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 LINC00114Q6XXX2 140 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 SSMEM1Q8WWF3 244 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 SLC25A33Q9BSK2 321 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 CNOT1A5YKK6 2376 aaKnown RBP9.86□□□□□ -0.83
NPHP4-202ENST00000378161 TMEM50AO95807 157 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 GATA3P23771 443 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 IGLV3-21P80748 117 aaPredicted RBP9.86□□□□□ -0.83
NPHP4-202ENST00000378161 RIGQ13278 110 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 ZNF501Q96CX3 271 aaPredicted RBP9.86□□□□□ -0.83
NPHP4-202ENST00000378161 FBXL15Q9H469 300 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 MPDU1O75352 247 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 APOHP02749 345 aaPredicted RBP9.86□□□□□ -0.83
NPHP4-202ENST00000378161 GCHFRP30047 84 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 PTGDSP41222 190 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 NDUFV3P56181 108 aaKnown RBP9.86□□□□□ -0.83
NPHP4-202ENST00000378161 ZNF415Q09FC8 603 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 TBC1D28Q2M2D7 210 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 RPEQ96AT9 228 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 GPHA2Q96T91 129 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 RTL8AQ9BWD3 113 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 NPCDR1Q9BY65 106 aa9.86□□□□□ -0.83
NPHP4-202ENST00000378161 MPDZO75970 2070 aa9.85□□□□□ -0.83
NPHP4-202ENST00000378161 C2CD4DB7Z1M9 353 aa9.85□□□□□ -0.83
NPHP4-202ENST00000378161 SFTA2Q6UW10 78 aa9.85□□□□□ -0.83
NPHP4-202ENST00000378161 HOXA3O43365 443 aaPredicted RBP9.85□□□□□ -0.83
NPHP4-202ENST00000378161 SLC25A5P05141 298 aaKnown RBP9.85□□□□□ -0.83
NPHP4-202ENST00000378161 NEU4Q8WWR8 484 aaPredicted RBP9.85□□□□□ -0.83
NPHP4-202ENST00000378161 EP300Q09472 2414 aaPredicted RBP9.85□□□□□ -0.83
NPHP4-202ENST00000378161 LOC389332A0A1B0GUA5 103 aa9.85□□□□□ -0.83
NPHP4-202ENST00000378161 LYPD3O95274 346 aa9.85□□□□□ -0.83
NPHP4-202ENST00000378161 HES3Q5TGS1 186 aa9.85□□□□□ -0.83
NPHP4-202ENST00000378161 FOXI2Q6ZQN5 318 aa9.85□□□□□ -0.83
NPHP4-202ENST00000378161 H1FXQ92522 213 aaKnown RBP9.85□□□□□ -0.83
NPHP4-202ENST00000378161 JMJD8Q96S16 334 aa9.85□□□□□ -0.83
NPHP4-202ENST00000378161 IL36RNQ9UBH0 155 aa9.85□□□□□ -0.83
NPHP4-202ENST00000378161 ZNF32P17041 273 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 C3orf56Q8N813 242 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 PLXNA3P51805 1871 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 C9JCJ5 164 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 MYF5P13349 255 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 CACNG7P62955 275 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 ZNF816Q0VGE8 651 aaPredicted RBP9.84□□□□□ -0.83
NPHP4-202ENST00000378161 SLC35E4Q6ICL7 350 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 OR2H1Q9GZK4 316 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 TRAV24A0A0B4J272 114 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 IGHV1OR15-9A0A0B4J2B8 117 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 FAM90A26D6RGX4 464 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 ATP5LO75964 103 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 RPL30P62888 115 aaKnown RBP9.84□□□□□ -0.83
NPHP4-202ENST00000378161 OR1L1Q8NH94 360 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 TP53TG3Q9ULZ0 132 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 LY96Q9Y6Y9 160 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 NCOR1O75376 2440 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 PTPRDP23468 1912 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 A0A0A6YYD4 124 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 SH2D7A6NKC9 451 aaPredicted RBP9.84□□□□□ -0.83
NPHP4-202ENST00000378161 C17orf51A8MQB3 221 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 WNT2P09544 360 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 CSRP1P21291 193 aaKnown RBP9.84□□□□□ -0.83
NPHP4-202ENST00000378161 NXPH1P58417 271 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 GAGE2AQ6NT46 116 aa9.84□□□□□ -0.83
NPHP4-202ENST00000378161 A0A0J9YW62 118 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 SPINT2O43291 252 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 IGHV4-34P06331 123 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 A0A096LPE4 126 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 A0A1W2PPZ6 126 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 WIPI1Q5MNZ9 446 aaPredicted RBP9.83□□□□□ -0.84
NPHP4-202ENST00000378161 DEFB123Q8N688 67 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 RASL11BQ9BPW5 248 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 ONECUT1Q9UBC0 465 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
NPHP4-202ENST00000378161 VWA8A3KMH1 1905 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 KIF26BQ2KJY2 2108 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 CACNA1EQ15878 2313 aa9.83□□□□□ -0.84
NPHP4-202ENST00000378161 FAM106CPP0CH98 169 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms