RNA–Protein interactions for RNA: ENST00000377595.7

UCHL3-201, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UCHL3, Length 844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-201ENST00000377595 LINC00476Q8WZB0 136 aa11.29□□□□□ -0.6
UCHL3-201ENST00000377595 MRGPRFQ96AM1 343 aa11.29□□□□□ -0.6
UCHL3-201ENST00000377595 NXF2Q9GZY0 626 aaKnown RBP11.29□□□□□ -0.6
UCHL3-201ENST00000377595 CSTL1Q9H114 145 aa11.29□□□□□ -0.6
UCHL3-201ENST00000377595 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 TNFAIP8O95379 198 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 PGAM2P15259 253 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 SNCAP37840 140 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 VBP1P61758 197 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 PAFAH1B2P68402 229 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 ZNF124Q15973 351 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 IZUMO4Q1ZYL8 232 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 SPINK9Q5DT21 86 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 TMEM217Q8N7C4 229 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 ZNF414Q96IQ9 312 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 OR10C1Q96KK4 312 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 FUNDC2Q9BWH2 189 aa11.28□□□□□ -0.6
UCHL3-201ENST00000377595 KLK5Q9Y337 293 aaPredicted RBP11.28□□□□□ -0.6
UCHL3-201ENST00000377595 MPTX1A8MV57 137 aa11.27□□□□□ -0.61
UCHL3-201ENST00000377595 FCGR2BP31994 310 aaPredicted RBP11.27□□□□□ -0.61
UCHL3-201ENST00000377595 RORCP51449 518 aa11.27□□□□□ -0.61
UCHL3-201ENST00000377595 RNASE12Q5GAN4 147 aaKnown RBP11.27□□□□□ -0.61
UCHL3-201ENST00000377595 DUSP18Q8NEJ0 188 aa11.27□□□□□ -0.61
UCHL3-201ENST00000377595 DNASE2O00115 360 aaPredicted RBP11.26□□□□□ -0.61
UCHL3-201ENST00000377595 IFNA17P01571 189 aa11.26□□□□□ -0.61
UCHL3-201ENST00000377595 PI3P19957 117 aa11.26□□□□□ -0.61
UCHL3-201ENST00000377595 NPBWR1P48145 328 aa11.26□□□□□ -0.61
UCHL3-201ENST00000377595 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
UCHL3-201ENST00000377595 MZT2AQ6P582 158 aa11.26□□□□□ -0.61
UCHL3-201ENST00000377595 TOMM20LQ6UXN7 152 aa11.26□□□□□ -0.61
UCHL3-201ENST00000377595 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
UCHL3-201ENST00000377595 ZNF114Q8NC26 417 aa11.26□□□□□ -0.61
UCHL3-201ENST00000377595 RARRES2Q99969 163 aa11.26□□□□□ -0.61
UCHL3-201ENST00000377595 GINS3Q9BRX5 216 aa11.26□□□□□ -0.61
UCHL3-201ENST00000377595 APOHP02749 345 aaPredicted RBP11.25□□□□□ -0.61
UCHL3-201ENST00000377595 ATF4P18848 351 aaPredicted RBP11.25□□□□□ -0.61
UCHL3-201ENST00000377595 ETV6P41212 452 aa11.25□□□□□ -0.61
UCHL3-201ENST00000377595 SUB1P53999 127 aaKnown RBP eCLIP11.25□□□□□ -0.61
UCHL3-201ENST00000377595 PIGPP57054 158 aa11.25□□□□□ -0.61
UCHL3-201ENST00000377595 RNASE10Q5GAN6 216 aaKnown RBP11.25□□□□□ -0.61
UCHL3-201ENST00000377595 FAM90A2PQ658T7 463 aa11.25□□□□□ -0.61
UCHL3-201ENST00000377595 LILRB2Q8N423 598 aa11.25□□□□□ -0.61
UCHL3-201ENST00000377595 KLK11Q9UBX7 282 aa11.25□□□□□ -0.61
UCHL3-201ENST00000377595 A0A0B4J293 547 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 IGHV3-66A0A0C4DH42 116 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 ST8SIA3O43173 380 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 DFFBO76075 338 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 ATG12O94817 140 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 TMEM50AO95807 157 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 IGKV1-5P01602 117 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 CD3DP04234 171 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 CD5P06127 495 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 RND3P61587 244 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 SLC35G3Q8N808 338 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 PHLDA1Q8WV24 401 aaPredicted RBP11.24□□□□□ -0.61
UCHL3-201ENST00000377595 ST8SIA2Q92186 375 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 ZNF486Q96H40 463 aaPredicted RBP11.24□□□□□ -0.61
UCHL3-201ENST00000377595 TP53RKQ96S44 253 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 PDCD10Q9BUL8 212 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 PUS1Q9Y606 427 aaKnown RBP eCLIP11.24□□□□□ -0.61
UCHL3-201ENST00000377595 BIRC6Q9NR09 4857 aa11.24□□□□□ -0.61
UCHL3-201ENST00000377595 HYDINQ4G0P3 5121 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 C3orf85A0A1B0GTC6 90 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 AKR1C2P52895 323 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 TRIM16LQ309B1 348 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 SP6Q3SY56 376 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 ZNF600Q6ZNG1 722 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 OR52I2Q8NH67 350 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 ZFAND1Q8TCF1 268 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 GATAD1Q8WUU5 269 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 MS4A6AQ9H2W1 248 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 ENY2Q9NPA8 101 aa11.23□□□□□ -0.61
UCHL3-201ENST00000377595 PLECQ15149 4684 aaKnown RBP11.22□□□□□ -0.61
UCHL3-201ENST00000377595 NPPCP23582 126 aa11.22□□□□□ -0.61
UCHL3-201ENST00000377595 DEFB131AP59861 70 aa11.22□□□□□ -0.61
UCHL3-201ENST00000377595 MLANAQ16655 118 aa11.22□□□□□ -0.61
UCHL3-201ENST00000377595 LHFPL1Q86WI0 220 aa11.22□□□□□ -0.61
UCHL3-201ENST00000377595 TERB2Q8NHR7 220 aa11.22□□□□□ -0.61
UCHL3-201ENST00000377595 RRNAD1Q96FB5 475 aaKnown RBP11.22□□□□□ -0.61
UCHL3-201ENST00000377595 VSIRQ9H7M9 311 aa11.22□□□□□ -0.61
UCHL3-201ENST00000377595 COPZ2Q9P299 210 aa11.22□□□□□ -0.61
UCHL3-201ENST00000377595 EXTL2Q9UBQ6 330 aa11.22□□□□□ -0.61
UCHL3-201ENST00000377595 A0A1B0GU03 582 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 ZNF182P17025 639 aaPredicted RBP11.21□□□□□ -0.61
UCHL3-201ENST00000377595 PPP5CP53041 499 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 NANOS2P60321 138 aaKnown RBP11.21□□□□□ -0.61
UCHL3-201ENST00000377595 SCGB2B2Q4G0G5 96 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 LEMD1Q68G75 181 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 ARRDC1Q8N5I2 433 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 RNASE11Q8TAA1 199 aaKnown RBP11.21□□□□□ -0.61
UCHL3-201ENST00000377595 C11orf45Q8TAV5 145 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 AP3S1Q92572 193 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 TMEM230Q96A57 120 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 ABHD1Q96SE0 405 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 MTFP1Q9UDX5 166 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 FBXL17Q9UF56 701 aa11.21□□□□□ -0.61
UCHL3-201ENST00000377595 RABAC1Q9UI14 185 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms