RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 PRCDQ00LT1 54 aa10.94□□□□□ -0.66
CLCN6-204ENST00000376491 TCF24Q7RTU0 167 aa10.94□□□□□ -0.66
CLCN6-204ENST00000376491 H2BFWTQ7Z2G1 175 aa10.94□□□□□ -0.66
CLCN6-204ENST00000376491 OR11H2Q8NH07 326 aa10.94□□□□□ -0.66
CLCN6-204ENST00000376491 PINX1Q96BK5 328 aaKnown RBP10.94□□□□□ -0.66
CLCN6-204ENST00000376491 GNG7O60262 68 aa10.93□□□□□ -0.66
CLCN6-204ENST00000376491 EIF4EP06730 217 aaKnown RBP10.93□□□□□ -0.66
CLCN6-204ENST00000376491 HSPE1P61604 102 aaKnown RBP10.93□□□□□ -0.66
CLCN6-204ENST00000376491 LSM3P62310 102 aaKnown RBP10.93□□□□□ -0.66
CLCN6-204ENST00000376491 IZUMO4Q1ZYL8 232 aa10.93□□□□□ -0.66
CLCN6-204ENST00000376491 KCTD21Q4G0X4 260 aa10.93□□□□□ -0.66
CLCN6-204ENST00000376491 TOMM20LQ6UXN7 152 aa10.93□□□□□ -0.66
CLCN6-204ENST00000376491 OR4A16Q8NH70 328 aa10.93□□□□□ -0.66
CLCN6-204ENST00000376491 ST8SIA2Q92186 375 aa10.93□□□□□ -0.66
CLCN6-204ENST00000376491 MRGPRFQ96AM1 343 aa10.93□□□□□ -0.66
CLCN6-204ENST00000376491 YIPF6Q96EC8 236 aa10.93□□□□□ -0.66
CLCN6-204ENST00000376491 VSIRQ9H7M9 311 aa10.93□□□□□ -0.66
CLCN6-204ENST00000376491 DEFB4AO15263 64 aa10.92□□□□□ -0.66
CLCN6-204ENST00000376491 TSPAN5P62079 268 aa10.92□□□□□ -0.66
CLCN6-204ENST00000376491 SPINK9Q5DT21 86 aa10.92□□□□□ -0.66
CLCN6-204ENST00000376491 LPCAT3Q6P1A2 487 aa10.92□□□□□ -0.66
CLCN6-204ENST00000376491 FAM24BQ8N5W8 94 aa10.92□□□□□ -0.66
CLCN6-204ENST00000376491 C11orf45Q8TAV5 145 aa10.92□□□□□ -0.66
CLCN6-204ENST00000376491 CMTM3Q96MX0 182 aa10.92□□□□□ -0.66
CLCN6-204ENST00000376491 C11orf68Q9H3H3 251 aaKnown RBP10.92□□□□□ -0.66
CLCN6-204ENST00000376491 ZFAND3Q9H8U3 227 aa10.92□□□□□ -0.66
CLCN6-204ENST00000376491 FBXL17Q9UF56 701 aa10.92□□□□□ -0.66
CLCN6-204ENST00000376491 IGHV3-66A0A0C4DH42 116 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 DFFBO76075 338 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 S100GP29377 79 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 UCP3P55916 312 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 DEFB131AP59861 70 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 ERHP84090 104 aaKnown RBP10.91□□□□□ -0.66
CLCN6-204ENST00000376491 PRR20EP86478 221 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 PRR20CP86479 221 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 PRR20DP86480 221 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 PRR20BP86481 221 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 PRR20AP86496 221 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 LEMD1Q68G75 181 aa10.91□□□□□ -0.66
CLCN6-204ENST00000376491 ST8SIA3O43173 380 aa10.9□□□□□ -0.66
CLCN6-204ENST00000376491 CA1P00915 261 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-204ENST00000376491 PAFAH1B2P68402 229 aa10.9□□□□□ -0.66
CLCN6-204ENST00000376491 RBMS2Q15434 407 aaKnown RBP10.9□□□□□ -0.66
CLCN6-204ENST00000376491 SNX29P2Q8IUI4 249 aa10.9□□□□□ -0.66
CLCN6-204ENST00000376491 GINS3Q9BRX5 216 aa10.9□□□□□ -0.66
CLCN6-204ENST00000376491 MFFQ9GZY8 342 aa10.9□□□□□ -0.66
CLCN6-204ENST00000376491 MS4A6AQ9H2W1 248 aa10.9□□□□□ -0.66
CLCN6-204ENST00000376491 PUS1Q9Y606 427 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLCN6-204ENST00000376491 A0A1B0GU03 582 aa10.89□□□□□ -0.67
CLCN6-204ENST00000376491 TMEM50AO95807 157 aa10.89□□□□□ -0.67
CLCN6-204ENST00000376491 IGKV1-5P01602 117 aa10.89□□□□□ -0.67
CLCN6-204ENST00000376491 GIG44P09565 113 aaPredicted RBP10.89□□□□□ -0.67
CLCN6-204ENST00000376491 P0C879 139 aa10.89□□□□□ -0.67
CLCN6-204ENST00000376491 TMEM187Q14656 261 aa10.89□□□□□ -0.67
CLCN6-204ENST00000376491 PVRIGQ6DKI7 326 aa10.89□□□□□ -0.67
CLCN6-204ENST00000376491 ZNF600Q6ZNG1 722 aa10.89□□□□□ -0.67
CLCN6-204ENST00000376491 DUSP18Q8NEJ0 188 aa10.89□□□□□ -0.67
CLCN6-204ENST00000376491 SCPEP1Q9HB40 452 aa10.89□□□□□ -0.67
CLCN6-204ENST00000376491 MRPL36Q9P0J6 103 aaKnown RBP10.89□□□□□ -0.67
CLCN6-204ENST00000376491 COMMD3Q9UBI1 195 aa10.89□□□□□ -0.67
CLCN6-204ENST00000376491 A0A0B4J293 547 aa10.88□□□□□ -0.67
CLCN6-204ENST00000376491 INS-IGF2F8WCM5 200 aa10.88□□□□□ -0.67
CLCN6-204ENST00000376491 M0QYG6 137 aa10.88□□□□□ -0.67
CLCN6-204ENST00000376491 DNASE2O00115 360 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-204ENST00000376491 APOA1P02647 267 aa10.88□□□□□ -0.67
CLCN6-204ENST00000376491 IFNA4P05014 189 aa10.88□□□□□ -0.67
CLCN6-204ENST00000376491 CD5P06127 495 aa10.88□□□□□ -0.67
CLCN6-204ENST00000376491 PI3P19957 117 aa10.88□□□□□ -0.67
CLCN6-204ENST00000376491 RCVRNP35243 200 aa10.88□□□□□ -0.67
CLCN6-204ENST00000376491 NPBWR1P48145 328 aa10.88□□□□□ -0.67
CLCN6-204ENST00000376491 MLANAQ16655 118 aa10.88□□□□□ -0.67
CLCN6-204ENST00000376491 DNAH6Q9C0G6 4158 aa10.87□□□□□ -0.67
CLCN6-204ENST00000376491 TRAV2A0A0B4J234 112 aa10.87□□□□□ -0.67
CLCN6-204ENST00000376491 RNASE2P10153 161 aaKnown RBP10.87□□□□□ -0.67
CLCN6-204ENST00000376491 ELK1P19419 428 aa10.87□□□□□ -0.67
CLCN6-204ENST00000376491 RND3P61587 244 aa10.87□□□□□ -0.67
CLCN6-204ENST00000376491 NCS1P62166 190 aa10.87□□□□□ -0.67
CLCN6-204ENST00000376491 RPL11P62913 178 aaKnown RBP10.87□□□□□ -0.67
CLCN6-204ENST00000376491 Q8NAQ8 132 aa10.87□□□□□ -0.67
CLCN6-204ENST00000376491 C2CD4CQ8TF44 421 aa10.87□□□□□ -0.67
CLCN6-204ENST00000376491 TP53RKQ96S44 253 aa10.87□□□□□ -0.67
CLCN6-204ENST00000376491 FNDC4Q9H6D8 234 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-204ENST00000376491 APLNQ9ULZ1 77 aa10.87□□□□□ -0.67
CLCN6-204ENST00000376491 SMIM31A0A1B0GVY4 71 aa10.86□□□□□ -0.67
CLCN6-204ENST00000376491 HPGDSO60760 199 aa10.86□□□□□ -0.67
CLCN6-204ENST00000376491 RBMY1A1P0DJD3 496 aaKnown RBP10.86□□□□□ -0.67
CLCN6-204ENST00000376491 RBMY1CP0DJD4 496 aa10.86□□□□□ -0.67
CLCN6-204ENST00000376491 SNCAP37840 140 aa10.86□□□□□ -0.67
CLCN6-204ENST00000376491 ETV6P41212 452 aa10.86□□□□□ -0.67
CLCN6-204ENST00000376491 PPP5CP53041 499 aa10.86□□□□□ -0.67
CLCN6-204ENST00000376491 PIGPP57054 158 aa10.86□□□□□ -0.67
CLCN6-204ENST00000376491 RBMY1FQ15415 496 aaKnown RBP10.86□□□□□ -0.67
CLCN6-204ENST00000376491 RNASE12Q5GAN4 147 aaKnown RBP10.86□□□□□ -0.67
CLCN6-204ENST00000376491 LHFPL1Q86WI0 220 aa10.86□□□□□ -0.67
CLCN6-204ENST00000376491 SLC35G3Q8N808 338 aa10.86□□□□□ -0.67
CLCN6-204ENST00000376491 RABAC1Q9UI14 185 aa10.86□□□□□ -0.67
CLCN6-204ENST00000376491 A0A0G2JRQ6 117 aa10.85□□□□□ -0.67
CLCN6-204ENST00000376491 K7EQG2 157 aa10.85□□□□□ -0.67
CLCN6-204ENST00000376491 IFNA17P01571 189 aa10.85□□□□□ -0.67
CLCN6-204ENST00000376491 PGAM2P15259 253 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms