RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ARSJQ5FYB0 599 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 Q8NFD4 153 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 EAF1Q96JC9 268 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 TRBV20OR9-2A0A075B6H5 130 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 IGHV3OR16-8A0A075B7F1 116 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 TRBV6-6A0A0A6YYG2 114 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 RPLP1P05386 114 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 SRSF7Q16629 238 aaKnown RBP eCLIP11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 LURAP1LQ8IV03 231 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 C11orf42Q8N5U0 333 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 SNHG12Q9BXW3 62 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 AMMECR1Q9Y4X0 333 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 DYSFO75923 2080 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 C19orf35Q6ZS72 473 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MDS2Q8NDY4 140 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MRPL20Q9BYC9 149 aaKnown RBP11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 GSX1Q9H4S2 264 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 IL36BQ9NZH7 164 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 PRNDQ9UKY0 176 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 RNF24Q9Y225 148 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 M0QZ24 198 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 SNAI2O43623 268 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 NDUFB3O43676 98 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 STAG3L2P0CL84 134 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 STAG3L3P0CL85 134 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 ACTL10Q5JWF8 245 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 OR1L4Q8NGR5 311 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 HSBP1L1C9JCN9 74 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 FTH1P19P0C7X4 201 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 LCN2P80188 198 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 FAM90A1Q86YD7 464 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MRPL37Q9BZE1 423 aaKnown RBP11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 GOLT1BQ9Y3E0 138 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 CACNA1AO00555 2505 aa11.85□□□□□ -0.51
TNFRSF1B-201ENST00000376259 SUB1P53999 127 aaKnown RBP eCLIP11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 RELBQ01201 579 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MMDQ15546 238 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 KRTAP27-1Q3LI81 207 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 OR5R1Q8NH85 324 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 GNB4Q9HAV0 340 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 LYNX1G3V0Z9 82 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 SAA1P0DJI8 122 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 LYNX1P0DP58 116 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 RPL8P62917 257 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 PDPNQ86YL7 162 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 WDR31Q8NA23 367 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 PGLYRP4Q96LB8 373 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 POLR3KQ9Y2Y1 108 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 PRRG2O14669 202 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 BPIFB3P59826 476 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 ZNF124Q15973 351 aa11.84□□□□□ -0.51
TNFRSF1B-201ENST00000376259 GGCTO75223 188 aaKnown RBP11.83□□□□□ -0.51
TNFRSF1B-201ENST00000376259 C8orf88P0DMB2 117 aa11.83□□□□□ -0.51
TNFRSF1B-201ENST00000376259 PTTG1IPP53801 180 aa11.83□□□□□ -0.51
TNFRSF1B-201ENST00000376259 BRWD1-AS2P59051 145 aa11.83□□□□□ -0.51
TNFRSF1B-201ENST00000376259 TCF24Q7RTU0 167 aa11.83□□□□□ -0.51
TNFRSF1B-201ENST00000376259 OR1L8Q8NGR8 309 aa11.83□□□□□ -0.51
TNFRSF1B-201ENST00000376259 GUCD1Q96NT3 240 aa11.83□□□□□ -0.51
TNFRSF1B-201ENST00000376259 NEU1Q99519 415 aa11.83□□□□□ -0.51
TNFRSF1B-201ENST00000376259 C11orf53Q8IXP5 236 aa11.83□□□□□ -0.52
TNFRSF1B-201ENST00000376259 NRN1Q9NPD7 142 aa11.83□□□□□ -0.52
TNFRSF1B-201ENST00000376259 CDX4O14627 284 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1B-201ENST00000376259 YPEL4Q96NS1 127 aa11.83□□□□□ -0.52
TNFRSF1B-201ENST00000376259 ANKRD11Q6UB99 2663 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1B-201ENST00000376259 TNFRSF1AP19438 455 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 DNAJC4Q9NNZ3 241 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 ASCL3Q9NQ33 180 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 KIAA1549Q9HCM3 1950 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 KBTBD11-OT1A0A1B0GTJ5 212 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 CBY3A6NI87 242 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 C15orf61A6NNL5 157 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 AHRRA9YTQ3 701 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 SIAH2O43255 324 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 TMEM108Q6UXF1 575 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 SSX8Q7RTT4 187 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 FAM222BQ8WU58 562 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 IFI27L2Q9H2X8 130 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 IDI2-AS1Q9NZ38 188 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 CSPG4Q6UVK1 2322 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 COL8A1P27658 744 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 LRRC10Q5BKY1 277 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 Q6ZVH6 145 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 PRNTQ86SH4 94 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 RNF2Q99496 336 aa11.82□□□□□ -0.52
TNFRSF1B-201ENST00000376259 TRGV8A0A0C4DH27 118 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 SRRM5B3KS81 715 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 SS18L1O75177 396 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 LGALS4P56470 323 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 PROP1O75360 226 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 CT45A6P0DMU7 189 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 CT45A5P0DMU8 189 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 CT45A7P0DMV0 189 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 GFRALQ6UXV0 394 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 IGFBPL1Q8WX77 278 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 CLEC5AQ9NY25 188 aa11.81□□□□□ -0.52
TNFRSF1B-201ENST00000376259 LOC389332A0A1B0GUA5 103 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms